| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0186 |
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| Symbol | |
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| ID | 4602442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 213204 |
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| End bp | 213869 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779497 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_926067 |
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| Protein GI | 119773327 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.240473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGC GCAAGGAACA CAGCCATGAG CAAATCCGTG AGATGGCCAT CAGTGAGGTA
GAGCGCTGGT TGGAGACAGA GCCTCTGCAG GATCTCAGCC TTCGCAAAGT GGCTCAACAC
ATCGGTTATG CCCCCAGTAC TCTGGTGAAG GTATTCGGCA GTTACCCTTA TTTGCTGCTC
GCCGTTGCCA GACGTGCGCT CGAAGCCCTG GACACCACTT TTGCAGGACA TTTGGGCGCC
GCCCGAGACA ATTCCTCATT CAATAATCTT CCTCTGGATG CGCTCAAGGC AAAAACGGCG
CTTAATGCCA TGGCGCAGAG CTATGGACAA TTTGCGCTCA GTTCGCCGGG CCGTTTTTCA
TTGGTCTTCG AGCTTAAGCT GCCCGCAGAA GCAACACTGC CGTCGGATCA CAGCGCCCTG
ATAGAATCCC TGCTGCAACG ACCTGAAGCT TGTCTAAGCG CCATGTTTCC ATCACTGGGA
GCTGCCCAGC TCAAATATCA AACCCGTCTC CTGTGGGCGG CACTTCATGG TCTGGTGGCG
CTGTCGTTGC AGGATAAGCT TTTTTTACTT GAACACTCTC TTGCTGAACT CCTGACGGTT
CAGCTTGGAA GCCAATTGCA TGCGATTTCT GTGCTGGATG CACAGCACAC GGAGGTGAGG
CCATGA
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| Protein sequence | MARRKEHSHE QIREMAISEV ERWLETEPLQ DLSLRKVAQH IGYAPSTLVK VFGSYPYLLL
AVARRALEAL DTTFAGHLGA ARDNSSFNNL PLDALKAKTA LNAMAQSYGQ FALSSPGRFS
LVFELKLPAE ATLPSDHSAL IESLLQRPEA CLSAMFPSLG AAQLKYQTRL LWAALHGLVA
LSLQDKLFLL EHSLAELLTV QLGSQLHAIS VLDAQHTEVR P
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