| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0182 |
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| Symbol | |
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| ID | 4602438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 210514 |
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| End bp | 211221 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779493 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_926063 |
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| Protein GI | 119773323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.915972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGGT ACAATCTTAC TACCCCATTT TTAATCTACC AATGGAATTT TCCAATGTTT
CCCTGGGACC AAATTGACAC AGTACTGCTC GACATGGATG GCACCCTGCT GGACCTGCAC
TTTGATAACC ACTTTTGGTT GTCACTGGTT CCCGGCACGC TGAGCCGAAT GCATGGCATC
AGCGCCGAGG CCGCCACCTC CCATGTCAGA GCGGCATACG ACAAGGTGGC GGGCACACTG
GAATGGTACT GCCTCGATTA TTGGGAACGG GAACTCGGTT TGGATATCAT GGCGCTGCAC
CGAACCCTGG TTGACAGAAT ACAGCTCAGG CAGGACAGCA TGCCCTTTTT GACGGCTCTC
GCCGATGCCG GAAAACGCCG CATCTTGCTC ACCAATGCCC ACCCGAACAG CCTCGCTCTG
AAGCTCGAAC ATACCGAACT GGCTTCAGGT TTGGATGAGA TGCTCTCGAG CCATCAGACC
GGTCATCCTA AAGAGTCACC GTTATTCTGG CAGGCGGTAT TTGCCCGCTT CGAACTCAAC
CCCAGGCGCT GTCTCTTTAT CGACGACAGT GAGGCGATTC TGCTGGCAGC AAAGCATGCC
GGTGTCGGGT TTCAGCTTGG GATCAGCAAT CCCGACAGCC AACAACCCAA CAAAGTGTTC
CATGACTTCC CAGCCATCCA TGATTACCGG CTTCTGCTCA ACGAGTAA
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| Protein sequence | MMGYNLTTPF LIYQWNFPMF PWDQIDTVLL DMDGTLLDLH FDNHFWLSLV PGTLSRMHGI
SAEAATSHVR AAYDKVAGTL EWYCLDYWER ELGLDIMALH RTLVDRIQLR QDSMPFLTAL
ADAGKRRILL TNAHPNSLAL KLEHTELASG LDEMLSSHQT GHPKESPLFW QAVFARFELN
PRRCLFIDDS EAILLAAKHA GVGFQLGISN PDSQQPNKVF HDFPAIHDYR LLLNE
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