| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0178 |
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| Symbol | |
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| ID | 4602434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 207582 |
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| End bp | 208058 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779489 |
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| Product | general secretion pathway protein M |
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| Protein accession | YP_926059 |
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| Protein GI | 119773319 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3149] Type II secretory pathway, component PulM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0577682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC TGAAAGCCTG GTGGGATGGC TTGGCAACCC GGGAGCAGCA ACTGGTTGGA
GCCGGTGGAT TTATGCTCGT TATCGCCGTG TTTTATTTCG GCATCTGGAG CCCGATCTCG
AATGCTGAAG AGGCGGCGCT GGGGCGGCTC AAAGCGCAGC AGCAAACCCT GAGCTATGTA
AAAGACACTG CCAACCGCCT TGCCGGTTTA CGCCAAAGTG GCAGTCGTCC GTCACTGACC
GGCAGCATGA CCAACGTGGT GAACCAAACC GCCAGCCGTT ATGGGCTGAC CATAACCCGC
ATGCAACCTC AGGGAAATAA AATCCAGCTA TGGATGGATG ATGTTCCCTT CGATGCCTTG
CTCGGTTATC TGGGCGATCT GGTGCAGCAA AAAGGTCTGT CGCTGGAGTT GCTGGATGTG
GGTGAAACCG ATACCCCCGG AATGGTGAAA GTTCGTCGTA TTCAATTGGC CCAATAA
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| Protein sequence | MDKLKAWWDG LATREQQLVG AGGFMLVIAV FYFGIWSPIS NAEEAALGRL KAQQQTLSYV
KDTANRLAGL RQSGSRPSLT GSMTNVVNQT ASRYGLTITR MQPQGNKIQL WMDDVPFDAL
LGYLGDLVQQ KGLSLELLDV GETDTPGMVK VRRIQLAQ
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