| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0176 |
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| Symbol | |
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| ID | 4602432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 205357 |
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| End bp | 206331 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779487 |
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| Product | general secretion pathway protein K |
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| Protein accession | YP_926057 |
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| Protein GI | 119773317 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAC AGCGTGGTGT CGCTCTCATC GTGGTTTTAC TGATTATCGC CATCGTGGCT
GTGATAGCCA CCAACGTGAC GGCACGTAAC CAAATCAGTA TGCGCCGCAC CATGAATCTG
GCCCAGTACG ATCAGGGTTA CTGGTACGCA CTCTCTGCCG AGGAGTTGGC CCGCAAGGTG
CTTAAACAGG ACTTGGATGA CAGCGAAGGC AAGGTGCATC TGCAGCAGTA CTGGGCACTC
GCCAACGTGG TGTTTCCGGT ACAGGGCGGG GAAATCGCCG GCAAGATTTC TGATATGCGG
GCCTGTTTTA ATCTCAACGC CCTGTCAGTG GAATCAAAAG AGGTCGAAAA CGGGCAACCC
CAGTTGCCGC TGGCGGCCAA GCAGTTCAAA GCCTTGCTGG TGGCTTTGGG TGTGGATGAT
TTTGGCGCCG AGCGCCTGAC CCATACCCTG AAAGATTATT TGGATGAAGA CACTGTCACC
AGCCCCTTTG GTGCAGAGGA TGCGGAGTAC GAGTCCAGGC CTGCGCCTTA CCGCGCGGCC
AATACTCTGA TGAATCACAA GAGTGAACTC AGGGCCGTGA TTGGATTTAC CGAAGAGGTG
TACCGCAATC TGTCACCTTA TGTGTGTGCC ATACCGGGCA ATGACAGACA GTTGCTGAAC
ATCAACACCC TCAAGGTAGA GCAGGCTGCA CTTCTGGTGG GTATGCTGGA CGGGCAGCTC
AGTGTGGGTG AGGCCGAAAG CATTATCAAT CAGCGGCCAT CGGAAGGGTT CGACAATCTG
GATGAGTTTT GGCAACTGAC CAGCGTAAAA CCGGACGATA AGCTCAAGTC CAGCATAGTG
CTCGACAGCA AGTTCTTTCT GCTGGAGGCG GGCTCGAAAT TGGATGACCG GATTTTCAGG
CTCGACAGCG TGCTGGCCCG AACGAGTGGT AACCATATGG ACACCCTGAC ACGCCAATAC
GGCGGCCAGC AATAG
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| Protein sequence | MRKQRGVALI VVLLIIAIVA VIATNVTARN QISMRRTMNL AQYDQGYWYA LSAEELARKV
LKQDLDDSEG KVHLQQYWAL ANVVFPVQGG EIAGKISDMR ACFNLNALSV ESKEVENGQP
QLPLAAKQFK ALLVALGVDD FGAERLTHTL KDYLDEDTVT SPFGAEDAEY ESRPAPYRAA
NTLMNHKSEL RAVIGFTEEV YRNLSPYVCA IPGNDRQLLN INTLKVEQAA LLVGMLDGQL
SVGEAESIIN QRPSEGFDNL DEFWQLTSVK PDDKLKSSIV LDSKFFLLEA GSKLDDRIFR
LDSVLARTSG NHMDTLTRQY GGQQ
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