| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0174 |
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| Symbol | |
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| ID | 4602430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 204232 |
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| End bp | 204597 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639779485 |
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| Product | general secretion pathway protein I |
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| Protein accession | YP_926055 |
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| Protein GI | 119773315 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.833715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCGC GGGGGATGAC GCTGCTGGAA GTCATGATGG CACTGGTCAT CTTTTCCATC
GCTGCCATCT CGCTGACCAA GAGTATGAGT GAGATGATGG GCAATCTGCC CATTCTCGAA
GAGCGTACCC TGGCACAATG GGTCGCTGAC AATCAGATGG TGGATGCCAA ACTGGAAAAA
GGCTTCCCCT CCATTGGTAA AAAAGACGGC GAAGTGGAAT TGGCTGGACG TACCTGGTAC
TGGCGCAAAG AAGTGGTAAA GACCACAGAT GATAATTTTC GCATGATCCG CATTAAGGTC
AGCGACGATG ACAGATATTC ACGGACTCTG GCCGAGATAA GCACTTATGT CTTTAAGAGA
GAATAA
|
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| Protein sequence | MKSRGMTLLE VMMALVIFSI AAISLTKSMS EMMGNLPILE ERTLAQWVAD NQMVDAKLEK
GFPSIGKKDG EVELAGRTWY WRKEVVKTTD DNFRMIRIKV SDDDRYSRTL AEISTYVFKR
E
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