Gene Sama_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0167 
Symbol 
ID4602423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp196621 
End bp197025 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content51% 
IMG OID639779478 
Productheat shock protein 15 
Protein accessionYP_926048 
Protein GI119773308 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0728996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCG GGAATCCAAT ACTGCAATCC GTCCGCCTCG ATAAATGGCT CTGGGCCGCT 
CGTTTTTACA AGACCCGAGC ACTGGCCAAG GAAATGATTA ACGGCGGTAA AGTACATTAC
AACGGGGCCC GCACCAAATC CAGCAAGAAT GCGGAAGTGG GTGCTGTGCT TAAGATACGT
CAGGGATATG ACGAAAAAGA GGTGGTCATT AAAAAATTGT CGGAACAGCG ACAAAATGCC
ACTCTGGCGC AAACCCTGTA TGAAGAAACG GCGCAGAGCA TACAAAAACG GTCCGCCAAT
GCCGAGGCTC GACGCCTGAA TATATTGAAC AATCCGTCAC CGGACACCAA GCCTGATAAG
AAACAGCGCC GTGAGTTGCT GAGGGCCAAG TCCGGCGATT ATTAA
 
Protein sequence
MESGNPILQS VRLDKWLWAA RFYKTRALAK EMINGGKVHY NGARTKSSKN AEVGAVLKIR 
QGYDEKEVVI KKLSEQRQNA TLAQTLYEET AQSIQKRSAN AEARRLNILN NPSPDTKPDK
KQRRELLRAK SGDY