| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0158 |
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| Symbol | |
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| ID | 4602415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 186759 |
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| End bp | 187667 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779470 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_926040 |
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| Protein GI | 119773300 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAGG GTCTGAACTG GGAAGACATT CGTTTGTTTG TGGCGGTTGC CGAGCTTGGC
AGCTTCAGCG CTGCGGCGCG GCAGTTGGGC TTGGGACAAC CTACCCTGAG CAGGCGTATC
GCAGAGCTTG AGGGGCAGTT GGGTGAGCCC TTGTTCATCC GCCGATCCCA GGGCTGTGAT
TTGGCGCCGG CGGGACTGCG GCTGTTACCT GCCGCTGCTC AAATGGCCCA ATGGGCCCAC
GATGCTGAGG TGAGCCTGGC CAGACCCGAG GAGCGTATTG CGGGTAAGGT GCGTATTACT
GCGCCGCCGG GACTTGCGCT GACTCTGCTG ACTCAAGTTG CACAGGGGCT GAGGGCACGA
TTTCCGGCGT TGACCCTGGA AGCATTGTCG TCCACACATC TGCTCGATTT GTCCAGGGGG
GAAGCAGACA TTGCCCTTCG CACCCAGGAG GTGGCTGAGC CTGGGCTCAT AACGGTTGGC
AAGATACTGA GCAAACCCCA ATTTTATGGC AGCCGGGAAT ATGCAGCGTC TCTGCCACCG
GGGGCGACAC TCTCGGATCT TGCACTTATC TGTTGGAGCG AGGATCAGGG GCATTTCAGG
GTAAACCGTG AATTGCATCG CCTGCTGCCG GGGTTTAAGC CCGCCTTTGC CAGCGACGAC
TTCAATGTGC AGTTGGGTGC CTGTGTGCAG GGACTGGGCG CCATGGTGCT CTACGGTGCC
CTGATGTCCC ACCCAATGCT CAGCTCTCTG GTGCGCTTGC CGGTGTCCTT TGACAGTGAG
TATCGCGGCG AAATCTTTAT TCAGGTGCAC AAGCGACTGT ACGGATTACC GAGGATCATG
GCGGTACTGG ATGAACTCGA TAGCTTTGGA CGTGGTATCG CAGAGTATCA GGGGCCGGGC
GAGGCGTGA
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| Protein sequence | MRQGLNWEDI RLFVAVAELG SFSAAARQLG LGQPTLSRRI AELEGQLGEP LFIRRSQGCD
LAPAGLRLLP AAAQMAQWAH DAEVSLARPE ERIAGKVRIT APPGLALTLL TQVAQGLRAR
FPALTLEALS STHLLDLSRG EADIALRTQE VAEPGLITVG KILSKPQFYG SREYAASLPP
GATLSDLALI CWSEDQGHFR VNRELHRLLP GFKPAFASDD FNVQLGACVQ GLGAMVLYGA
LMSHPMLSSL VRLPVSFDSE YRGEIFIQVH KRLYGLPRIM AVLDELDSFG RGIAEYQGPG
EA
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