| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0154 |
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| Symbol | |
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| ID | 4602411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 180034 |
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| End bp | 180747 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779466 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_926036 |
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| Protein GI | 119773296 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.13097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA AAATCCTCTA CATCGAAGAT GACCATAAAC TTGCCGGGTT GGTAAAGAAC
TTTCTGCAGT CCCATGGTTT TGAGGTGACA CACCTGCCGT CGGCCGAGGG GGCATTGGAG
CAGCTCTACT ACGGCAGTTT CGATTTGCTG CTCTTGGACA TAGGCCTGCC AACGGAAGAT
GGCATCAGTC TGTGCCGACA AATCCGCGAC CGTTTTACTG GGCAAATTCT GTTTATGACG
GCGAGGCGAT CTGCCGTGGA TGAGGTGGAA GGCTTGATGG CAGGCGCCGA TGATTACCTC
ACCAAGCCGG TGGCGCCTGA AATCCTGCTG GCGCGTATCC AAACCCGCTT AAAGCGCCGC
GAGCCGCAAG AGATGGTAGA GGTTGATACT GCCAAACCCC AATCTGAGAT GCACTTTGGT
CGCCTTTGCA TTCGTCTTGC GGCCCGGCAG GCGTTTTGGG ATGAAGAATC ACTGCGTCTG
ACCACAGCCG AGTTCGATAT TCTGGCGCAG CTGGCCAAAC ACGCAGGTCA GATAGTCTGC
CGTGAAGACC TGTTCAAGTA CACCACAGGT GCACCCTACG ATGGGCTCAA TCGCACCATG
GACAACAGGA TCAGCCGCCT CAGACGCAAG CTGGGGGATA ACATGGACGA TCCCTTTAAA
ATCAAAACTA TCTGGGGTAA GGGTTACCTG TTTGTCCCGG ATATTTGGGG CTAG
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| Protein sequence | MQAKILYIED DHKLAGLVKN FLQSHGFEVT HLPSAEGALE QLYYGSFDLL LLDIGLPTED
GISLCRQIRD RFTGQILFMT ARRSAVDEVE GLMAGADDYL TKPVAPEILL ARIQTRLKRR
EPQEMVEVDT AKPQSEMHFG RLCIRLAARQ AFWDEESLRL TTAEFDILAQ LAKHAGQIVC
REDLFKYTTG APYDGLNRTM DNRISRLRRK LGDNMDDPFK IKTIWGKGYL FVPDIWG
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