Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0145 |
Symbol | |
ID | 4602402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 167944 |
End bp | 168264 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639779457 |
Product | endonuclease |
Protein accession | YP_926027 |
Protein GI | 119773287 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCTA TCTGGCAGCT TTATATTATC CGCTGCGCCA CTGGCGAGCT GTACACCGGC GTGACAACCA ACGTGGCTCG CCGTTTCGAT GAGCATCAGT GCGGCGGTGC CAGGGCCGCC AAATATTTGC GTGGTCGTGG CCCGCTTACT CTGGTGTATC AGGAGAATGT CGGCAGCCGT GGCGATGCGC TGCGCCGAGA GCTGGCGGTC AAGAAGCTTT CAAAGGCCGC CAAGGAAGCC CTCATCAGCC CAGTGGCTCC GGGGAACCCG GCGCCGGGAA AGTTATCTAA TCCGAAAAAG GCGGTTGAGG TTTTTGGGTG A
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Protein sequence | MSPIWQLYII RCATGELYTG VTTNVARRFD EHQCGGARAA KYLRGRGPLT LVYQENVGSR GDALRRELAV KKLSKAAKEA LISPVAPGNP APGKLSNPKK AVEVFG
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