| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0144 |
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| Symbol | |
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| ID | 4602401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 165836 |
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| End bp | 167947 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779456 |
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| Product | oligopeptidase B |
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| Protein accession | YP_926026 |
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| Protein GI | 119773286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCCG CATGCAGTCA CAATATCGAT AAACATTCAG GAGCCCTTGC CCGGGAAGAT
GCGGCGCCTG TGGCCCCTGT CGCGGCCAAG GTGCCCTATG AAATGACTCA CCATGGTGTC
ACCCGGGTGG ATGACTACTA TTGGCTGCGG GACGATGACC GCGCCGACGC GGATGTGATA
GCCCATCTCA ATGCCGAAAA TGCTTACGCC GAAGCCCGAA TGGCACCCTG GAAAGGGTTA
AAAGAAAAAC TCTTTGCCGA AATGACCGCC CGCATGGTGA AGGACGACAG CTCAGTGCCT
TATCTGTGGC ATGGCAAGTA CTATTACCGC CGGGTGGAAG GCGACAAAGA GTACCCCATC
ATCGCGCGCA AAGCGTCCCT GAACGGGACT GAAGAAGTGT TGCTGGATGC CAATGAACGT
GCTGCCGGGC AAGATTTTTA TTCCCTTGGC AATGTCAGCG TCAGTGAAGA TGGCAAGCTT
ATGGCCTTCG GGGAAGACCT GCTGAGCCGC CGGATTTACA AGATCTATTT CAAGGATTTG
GCCAGCGGTA ACTTGTTGGC CGATGTGCTG GACAACACCG AAGGCGAAGC TGTGTGGGCC
AACGATGGCA AGCATGTGTT TTACATCGCC AAAGACCCTC AGACGCTGCT TGGCTATCAG
GTGTATCGCC ACCGTCTTGG GACGCCTCAA AGCGAAGATG TGCTGGTGTA TGAAGAGGCC
GACGACAGCT TCTATATCGG CCTTGGCAAG ACCCTTGATG GCAGCCGGAT TTTACTCTTC
CATGAAAGTA CCACGACCAC CGAAGTGCAG CTGTTGGATG CCAACCAGCC GCTGGGCAAT
TTCACCTCTT TTCTGCCGAG GGAAGAGGGT CATGAATATG CCATCACCAA GCTGGGGGAT
GAGTACTATG TGCTTACCAA CTGGCAGGCC ACCAATTTCC GTCTGATGAA AGTCAATGGC
ACTGACACCG CCGACAAATC CCGCTGGCAG GAAGTTGTGC CCTATAACGA GCAGGTGCGT
ATTGAAGATA TGCTGCTGCT CAAAGACGCC CTGGTGCTGC AAACCCGGGA AGCGGGTGCT
ACCCACATAC GGGTCTACGA TCCGGATGGC AGCCAGAGCC GGGAAATCCA TTTCGATGAA
GCCGCGTACG TGACCTGGCT TGGCACCAAC CGAGACCAGA GCGCGAACAC AGTACGTTTT
GGCTATTCCA GCCTGACCAC CCCAGATGCT ACCTACGAAT ACGACATTCA CACCGGTGAG
CGTAAGTTGC TTAAGCAGCT TAAGGTGCCG GGGTTTGAAG CAGGCGCCTA TCAGAGCGAA
CGTTTGATGC TGCCCGCCCG GGATGGCGTG TTGGTGCCCG TGTCTGTGGT GTATCGCAAA
GATAAATTCA AAAAAGATGG CACCAATCCG CTCTACCAAT ATGGCTATGG TGCCTATGGC
AGCGTGGTCG ATCCGGACTT TTCCCTGTCG GCGCTGAGCC TGCTGGACAG AGGCGTGGTG
TATGCCATCG CCCACGTACG GGGCGGCGAG ATGCTGGGCA GGCCCTGGTA TGATGCCGGT
CGCATGTTCG ACAAGAAGAA CTCCTTCACC GACTTTATTG ATGTGACCGA CGCACTGGTC
AATGCCGGTT ACGGTGCCAG AGACAAGGTT GTGGCCAGTG GTGCCAGTGC CGGCGGACTG
CTTGTGGGCG CCGTGGCCAA TATGGCGCCC GACAGGTACC TGGCCATCCA TGCCGGTGTG
CCCTTTGTGG ATGTGGTCAC CACTATGCTG GATGAGTCGA TTCCACTGAC CACCAACGAG
TACGACGAGT GGGGCAACCC CAACGAGAAG CCGAGCTTTG ACTATATGCT CAGCTACTCG
CCCTATGACA ACGTGACCCG TCAGCCATAT CCCCATCTGT TGGTCACCAC AGGCCTGCAC
GACTCACAGG TTCAGTACTT TGAGCCGGCC AAGTGGGTCG CTAAATTGCG TGAGCTTAAA
ACCGATAACA ACGAACTGCT GCTGGTGACG GATATGGAAG CAGGCCATGG TGGCAAGTCG
GGCCGCTATA GCCAGTTTGA GGATATGGCG TTGGAATACG CATTTTTCCT GCACCTGTGG
GGCATAGAGT GA
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| Protein sequence | MVSACSHNID KHSGALARED AAPVAPVAAK VPYEMTHHGV TRVDDYYWLR DDDRADADVI
AHLNAENAYA EARMAPWKGL KEKLFAEMTA RMVKDDSSVP YLWHGKYYYR RVEGDKEYPI
IARKASLNGT EEVLLDANER AAGQDFYSLG NVSVSEDGKL MAFGEDLLSR RIYKIYFKDL
ASGNLLADVL DNTEGEAVWA NDGKHVFYIA KDPQTLLGYQ VYRHRLGTPQ SEDVLVYEEA
DDSFYIGLGK TLDGSRILLF HESTTTTEVQ LLDANQPLGN FTSFLPREEG HEYAITKLGD
EYYVLTNWQA TNFRLMKVNG TDTADKSRWQ EVVPYNEQVR IEDMLLLKDA LVLQTREAGA
THIRVYDPDG SQSREIHFDE AAYVTWLGTN RDQSANTVRF GYSSLTTPDA TYEYDIHTGE
RKLLKQLKVP GFEAGAYQSE RLMLPARDGV LVPVSVVYRK DKFKKDGTNP LYQYGYGAYG
SVVDPDFSLS ALSLLDRGVV YAIAHVRGGE MLGRPWYDAG RMFDKKNSFT DFIDVTDALV
NAGYGARDKV VASGASAGGL LVGAVANMAP DRYLAIHAGV PFVDVVTTML DESIPLTTNE
YDEWGNPNEK PSFDYMLSYS PYDNVTRQPY PHLLVTTGLH DSQVQYFEPA KWVAKLRELK
TDNNELLLVT DMEAGHGGKS GRYSQFEDMA LEYAFFLHLW GIE
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