| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0143 |
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| Symbol | |
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| ID | 4602400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 164603 |
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| End bp | 165271 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639779455 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_926025 |
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| Protein GI | 119773285 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCAGA TTCAAACATC CCCTTCACTG CTGGCGCAGT TTGGCAATCC GCTTACCCGG
GTCGATGCGG CCCTCGATGC ACTGCGGCGC GGCCATGGCG TACTTGTGGT CGACGATGAA
GACCGTGAAA ACGAAGGCGA CCTGATTTTT GCCGCCGAGT CATTAACCAA TGCGCAGATG
GCCATGCTTA TCCGTGAGTG TTCAGGCATC GTTTGCCTGT GCCTGACCGA TGAGCGGGTG
CGCCAGCTTG AGTTGCCACC CATGGTGGCG CAAAACAACA GCCAATACGG TACTGCATTT
ACCGTGAGTA TCGAAGCCAA ACAAGGCGTC ACCACAGGCG TGTCTGCCGC TGACCGGGTC
ACCACCATCA GGGCAGCCAT TGCCGATGGT GCCAAACCCT GTGATCTGGC CCGTCCGGGT
CATGTTTATC CGCTGCGGGC ACACCCCGCA GGCGTACTTG GACGCCGTGG TCATACCGAA
GGCACTGTAG ACCTGATGCG TCTGGCGGGG CTGAAGCCCT TTGGTGTGCT GTGCGAGCTG
ACCAACCCAG ATGGCACCAT GGCACGCCTG CCTGAAATCA TCGCCTTCGG CCAGGCTCAC
CAGATGCCGG TGCTCAGCAT TGAAGATCTG GTGCAATACC GTGAGGCACT GATGAGCCAA
AGCGCCTGA
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| Protein sequence | MDQIQTSPSL LAQFGNPLTR VDAALDALRR GHGVLVVDDE DRENEGDLIF AAESLTNAQM
AMLIRECSGI VCLCLTDERV RQLELPPMVA QNNSQYGTAF TVSIEAKQGV TTGVSAADRV
TTIRAAIADG AKPCDLARPG HVYPLRAHPA GVLGRRGHTE GTVDLMRLAG LKPFGVLCEL
TNPDGTMARL PEIIAFGQAH QMPVLSIEDL VQYREALMSQ SA
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