| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0133 |
|---|
| Symbol | |
|---|
| ID | 4602390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 150362 |
|---|
| End bp | 151033 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639779445 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926015 |
|---|
| Protein GI | 119773275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCTAC TATCTCCAAC AAGCCGAAGA GCACGCAAGC CGTTGGTGGT AGATGGCCGA
TGTGGACTGG CCATCCTGGG TACCCTCGGC ATGTCGATGC TGGCCCTGAT GTCGCCTCCG
GTTTGGCTGT GGTTACCCGG GCTTGCCGGG CTTGCCATGG CCATCGATGG CAGCCGCTTT
GCCAGCCCCA GGCCCCTGGT ACTGCTGTTT GTCTGGCAAT GGCTGCTTAC CAGTGCCCTT
TATGGTCTGT TTTGGGGTAG CGAGCGTTTG GGTGAGGCGG CATGGGTGGC CCTGAGGCTG
CTGCTGGCTT TTTTACCCCC CTGGTACCTG GCTATACGCT TTGCGCCTGA GCGTCTTGGC
GCCTTCTTTG CGAACTGGCT TTCACCGCGC TGGGCCTTTG TGCTGTCGGC GTCGCTCAAT
GCCTTGCCGT TTGTGTTAAC AGAAGCGCGG GAGATCTACC GGCTGCAGCG GCTCAGAGGC
GCGCGAATTG GGGCGAAAGA CCTGATTAAT CCGCTGAATT GGCGAGAGCT GGTTCATACG
GTGATAAGCC CCCTGCTGAT TGAATTGTTG AAATTATCCC GGCGTCAGGC ACTGGCTGCG
AAGAGTCGCG GTTTTGGTCA GAGTGCCAAT CCCAGTCACT GGCCCCATAG AGGAAAGCAA
TATGAAGACT GA
|
|---|
| Protein sequence | MRLLSPTSRR ARKPLVVDGR CGLAILGTLG MSMLALMSPP VWLWLPGLAG LAMAIDGSRF
ASPRPLVLLF VWQWLLTSAL YGLFWGSERL GEAAWVALRL LLAFLPPWYL AIRFAPERLG
AFFANWLSPR WAFVLSASLN ALPFVLTEAR EIYRLQRLRG ARIGAKDLIN PLNWRELVHT
VISPLLIELL KLSRRQALAA KSRGFGQSAN PSHWPHRGKQ YED
|
|---|
| |