Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0129 |
Symbol | |
ID | 4602386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 144286 |
End bp | 145017 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779441 |
Product | hypothetical protein |
Protein accession | YP_926011 |
Protein GI | 119773271 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00774335 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCTGA AATCTGTCTT GCTGGGGTGT GTGCTGTGGG TACTTGGTTT TACTGTGGCC GCGTCACCCG TTGAAATCCG AGTCGTCACG GCGGCCTGGA TGGGTTATGC CAATGCCCAG GGAGAAGGAT ACTACTTTGA AATTCTGCGC CAGGCATTTC CCTCCCCTGA GTGGCAACTC AAGGTCACTG TCGTGCCGTT CGCCCGCAGT ATTCAACTGC TGCAGCACGA CAAGGCCGAT ATAGTGCTCG GTGTTTATCA GGGCGATTTA CGCAAGGGAC TTTACAGCGC GGCTGCCGTT GAAATGGATA CCGTGGATGT GGCGCTGACG CCCGCTATGG CCCGTGATTG GCAAGGGCTG GAGAGTTTAC ATCTGCGCAA GGTACAGGCC TACATAGCCT ATGGTTTCGA CCGTCTCATT CCTTATCCCA TGTACTATGA AGAAAGCAGC AGCCTGAGGG ATATGTTGCA GCGGCTCAAC GACGGGCGTA TCGATGCGGT GCTCGATTAC AGGCCGGGTA TGGAAAATGC CGCCAGGTTA TTGGAAAGCG AGCCCAATTT TGTGATTGTG GATGATGTCG TCAGTGCAGC GGTGTATTTC GGTTTTGTCG GTACCCGCTT TGGAGAGTCA CTCAAACTCA GATTCGATGA GGCCCATAAG GAGGTGTTAG CCTCGGGGTT GCAGCAGCGT CTCTTTGAGG CTACCCAGCG CAAACTCGGC CTTATCCCAT AG
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Protein sequence | MGLKSVLLGC VLWVLGFTVA ASPVEIRVVT AAWMGYANAQ GEGYYFEILR QAFPSPEWQL KVTVVPFARS IQLLQHDKAD IVLGVYQGDL RKGLYSAAAV EMDTVDVALT PAMARDWQGL ESLHLRKVQA YIAYGFDRLI PYPMYYEESS SLRDMLQRLN DGRIDAVLDY RPGMENAARL LESEPNFVIV DDVVSAAVYF GFVGTRFGES LKLRFDEAHK EVLASGLQQR LFEATQRKLG LIP
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