Gene Sama_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0129 
Symbol 
ID4602386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp144286 
End bp145017 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID639779441 
Producthypothetical protein 
Protein accessionYP_926011 
Protein GI119773271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00774335 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTGA AATCTGTCTT GCTGGGGTGT GTGCTGTGGG TACTTGGTTT TACTGTGGCC 
GCGTCACCCG TTGAAATCCG AGTCGTCACG GCGGCCTGGA TGGGTTATGC CAATGCCCAG
GGAGAAGGAT ACTACTTTGA AATTCTGCGC CAGGCATTTC CCTCCCCTGA GTGGCAACTC
AAGGTCACTG TCGTGCCGTT CGCCCGCAGT ATTCAACTGC TGCAGCACGA CAAGGCCGAT
ATAGTGCTCG GTGTTTATCA GGGCGATTTA CGCAAGGGAC TTTACAGCGC GGCTGCCGTT
GAAATGGATA CCGTGGATGT GGCGCTGACG CCCGCTATGG CCCGTGATTG GCAAGGGCTG
GAGAGTTTAC ATCTGCGCAA GGTACAGGCC TACATAGCCT ATGGTTTCGA CCGTCTCATT
CCTTATCCCA TGTACTATGA AGAAAGCAGC AGCCTGAGGG ATATGTTGCA GCGGCTCAAC
GACGGGCGTA TCGATGCGGT GCTCGATTAC AGGCCGGGTA TGGAAAATGC CGCCAGGTTA
TTGGAAAGCG AGCCCAATTT TGTGATTGTG GATGATGTCG TCAGTGCAGC GGTGTATTTC
GGTTTTGTCG GTACCCGCTT TGGAGAGTCA CTCAAACTCA GATTCGATGA GGCCCATAAG
GAGGTGTTAG CCTCGGGGTT GCAGCAGCGT CTCTTTGAGG CTACCCAGCG CAAACTCGGC
CTTATCCCAT AG
 
Protein sequence
MGLKSVLLGC VLWVLGFTVA ASPVEIRVVT AAWMGYANAQ GEGYYFEILR QAFPSPEWQL 
KVTVVPFARS IQLLQHDKAD IVLGVYQGDL RKGLYSAAAV EMDTVDVALT PAMARDWQGL
ESLHLRKVQA YIAYGFDRLI PYPMYYEESS SLRDMLQRLN DGRIDAVLDY RPGMENAARL
LESEPNFVIV DDVVSAAVYF GFVGTRFGES LKLRFDEAHK EVLASGLQQR LFEATQRKLG
LIP