| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0114 |
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| Symbol | |
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| ID | 4602371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 127172 |
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| End bp | 128935 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779426 |
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| Product | hypothetical protein |
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| Protein accession | YP_925996 |
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| Protein GI | 119773256 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.112922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAT TGTTCAGACT CTTTGCCGAT GACGATAAGA AACGGGTGTT TTGGGCCCTC
TTCAGTCTTA CGCTGCTGGT GATGTTGATT GGCATTGGCA TGCGATCTCC CTGGCCTGCC
GATGAGCCAC GTTTTGTGGA AGTAGCCCGG GAAATGGTGA TGGGCGGTGA ATGGTTGTTC
CCCACCCGCG GTGGAGAATT CTATCCCGAT AAACCCCCGG TATTTATGTG GGCCATCGCC
GCTGTTTATT GGTTGATTGG CGACCTCAAA CTGGCCTTTC TTATTCCCAA CGCCCTCTGC
GGATTGTTGA CCGTCATGCT GGTTTACGAC TTGGGTTGCC GTTTGTGGAG CGTCAGGGTC
GGCCGTAATG CAGCCTTGTT GCTTTTGTTG GTGCCGCAAT TTTTGATGCA GGCAAAGAAT
GCCCAGATAG ATGCCATGGT AGCCTGTTGG ATTACCTTGG GATGCTATGG TCTGGTGAGG
CACTTTGTGC TCGGACCCCA TTGGCGTTGG TTTTTTGCTT CCTGGGCCTT TATGGGGCTT
GGGGTAATCA CCAAGGGGGT GGGTTTTTTA CCGCTGCTGA TGTTATTGCC GCTGGCTTGG
TATCGCTGGC AAATGGTCAC CGGCAGGGCA CTTTTGCCCA ACCAGGCCTG GTCCTGGAAG
GTAGCCCTTG GGCCACTGGC TATGTTGGGC GTTATTGCCC TGTGGCTGGT ACCCATGTTG
CTGGCAGTTT GGCTGGATGC CACCCCAGAG CACCAGGCCT ATATGAACAA CATCTTATTC
AAGCAAACCG GTGAGCGTTA CGTTAACGCC TGGCATCATA TCAAACCCTG GTATTTCTTT
ATTTTCAGCG TCATTCCCTG GCTCTGGTTC CCGTTGCCCT TGTTGGCCAT TGCCCACGGT
AAACGTTTTG TAGCGCGCAT CAAGCAAGAT CCCGTGATTG CCATTTTGCT GCTTTGGGTT
TTACTGGTGG TGGTGTTCTT CAGCCTGAGC CCGGGCAAGC GCAACGTATA TATTTTGCCT
GCTCTCCCTA TGGCCAGCTT GGCGATGGCG GCGATTCTTG ACGGTGAGCA GCCCAAACGC
TGGTTTGAGC TGCTGGTGAA GGGGGGCTTG TGGGTCTTGG GCACACTATT GCTGCTTGTG
GGGGTGCTGG CGCTTTTGCA CCATCCCAAG CTTGCTGCCC GGCTTGCCGA TTACACCGAC
GACTTAACGG GCATAGGCCT GATGCTGCTG GTGCTTGGCG GTTTGTGGCT TACCTGCTTG
TGGTGGCTCA GAAAGCAAAT CTCGCTGCTC AATGCCGGTG CCGTGACATT ACTTGGCTGG
CTAGTGGTTG GCACCTGGGG CTATATGCTG CTCGATAGCA TGCGTACACC GCAGCAACTC
ATGCAGCATA CGGCGCAAAC CATAGGTGAA GATGCCGAGC TTGGGCTGAT TAAGTTCAAG
GAACAATTCA TCCTGTTTTC ACCTGTGTCT GTGACGCACT TCAGCTACCT GGCGAGTGTC
GAGGAACAAG AGCGCAATGC CTGGGCCTGG ATGAAAGAAG CAGGGATGAT GAAAGGCAAT
GCCTCTGAAC AGCAACGTTT CTTGCTGGTT CCCGAAGGCA CAACACTGAA CTGTTTTGAA
CTGTCCAGGG GCCGTAGCAT GGGCATTGCC CACAGGGACA ACTGGCTTTT GCTGGATGCA
GACGCCATGT CAGTAAGCTG TGATGCACCC AAACGGGTCT ACCGTTACCA CACTGACCAT
CCGGGCCATT GGCTTACGGA CTAG
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| Protein sequence | MTALFRLFAD DDKKRVFWAL FSLTLLVMLI GIGMRSPWPA DEPRFVEVAR EMVMGGEWLF
PTRGGEFYPD KPPVFMWAIA AVYWLIGDLK LAFLIPNALC GLLTVMLVYD LGCRLWSVRV
GRNAALLLLL VPQFLMQAKN AQIDAMVACW ITLGCYGLVR HFVLGPHWRW FFASWAFMGL
GVITKGVGFL PLLMLLPLAW YRWQMVTGRA LLPNQAWSWK VALGPLAMLG VIALWLVPML
LAVWLDATPE HQAYMNNILF KQTGERYVNA WHHIKPWYFF IFSVIPWLWF PLPLLAIAHG
KRFVARIKQD PVIAILLLWV LLVVVFFSLS PGKRNVYILP ALPMASLAMA AILDGEQPKR
WFELLVKGGL WVLGTLLLLV GVLALLHHPK LAARLADYTD DLTGIGLMLL VLGGLWLTCL
WWLRKQISLL NAGAVTLLGW LVVGTWGYML LDSMRTPQQL MQHTAQTIGE DAELGLIKFK
EQFILFSPVS VTHFSYLASV EEQERNAWAW MKEAGMMKGN ASEQQRFLLV PEGTTLNCFE
LSRGRSMGIA HRDNWLLLDA DAMSVSCDAP KRVYRYHTDH PGHWLTD
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