| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0099 |
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| Symbol | |
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| ID | 4602356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 112290 |
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| End bp | 112925 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779411 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_925981 |
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| Protein GI | 119773241 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0469573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000212753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCC GCGACAAAAT CATTCAGGCC AGCCTGGAGC TCTTTAACGA GCATGGCGAG
CGCACCATTA CGACCAATCA TATCGCTGCC CATCTGGATA TCAGCCCCGG CAACCTCTAT
TACCACTTCC GAAACAAGGA AGACATTATC CGTTGCATCT TCGACCAGTA CGAACAGCAC
CTGTTGCTGG GCTTTAAGCC CTATGCGGAT CAAAAGGTCG ACCTTGAACT GCTGATGAGC
TATTTCGATG CCATGTTCTA CACCATGTGG CAGTTCCGTT TTATGTACGC CAACCTGGCA
GACATTCTCG CCCGCGATGA CACTCTCAAG GCACGTTATC TCAAGGTACA ACAAGCCGTG
CTGGAACAGT CGATTGCCGT TCTCAATCAA TTGAAAAAGG ATGGTATTTT ACAAATCGAA
GACGAGCGCA TTGCCGATTT GGCCGACACC ATCAAGATGA TTATCGGCTT TTGGATCAGC
TACAAGCTGA CCCAATCCAG CATTGCCACC ATCAGCAAGG CATCGCTTTA CGAAGGTCTG
TTACGGGTAC TGATGATTTT CAAGGCCTAC TCCACCCCGG ATTCACTGGC CAACTTCGAC
CGTCTCGAGC AGCATTTTCG CTCTCAATCC AACTGA
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| Protein sequence | MKTRDKIIQA SLELFNEHGE RTITTNHIAA HLDISPGNLY YHFRNKEDII RCIFDQYEQH
LLLGFKPYAD QKVDLELLMS YFDAMFYTMW QFRFMYANLA DILARDDTLK ARYLKVQQAV
LEQSIAVLNQ LKKDGILQIE DERIADLADT IKMIIGFWIS YKLTQSSIAT ISKASLYEGL
LRVLMIFKAY STPDSLANFD RLEQHFRSQS N
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