| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0094 |
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| Symbol | |
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| ID | 4602351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 107836 |
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| End bp | 108489 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779406 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_925976 |
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| Protein GI | 119773236 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000108389 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0160818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TCGCAGTACT CTTGGCGGGC TGTGGTGTCT TTGACGGCAG CGAAATTCAT
GAATCGGTAC TGACCTTGTT GTCCCTGACC AAGGCCGGTG CCCGTTTTCA GTGTTTTGCA
CCGGATATTC CCCAGCTGCA TGTGGTCAAT CATCTGTCCG GTGAGGTGGC AAAAGACGAA
CATCGCAACG TGTTGGTTGA GGCTGCGCGC ATTGCCCGGG GCGACATTAA GGCCACCACA
GAGTTAAATG TGGCCGACTT CGATGCGTTG ATTATCCCCG GTGGTTTTGG TGCGGCAAAA
AACCTGTGCA ATTTCGCTCT GGTAGGCGCG GATTGCGACG TGGCACCCGA GGTGCGTGAC
TTTATTGCTG AGTTCGCCCT GTCGAAAAAG CCGGTAGGCT TTATCTGTAT TGCACCTGTG
ATGATCCCCA AGCTCTACGG TAAGGGCGCC ATCGGTACTA TTGGTCACGA CAAGGGGACC
AGTGAAGCTT TTTGTATCAT GGGCGGTGAT CATCGGGATG CGTCAGTACA CGAGATTGTG
GTGGACGAGG CTAACAAGAT AGTGAGCACT CCGGCATATA TGTTGGCAGG CAACATCGCC
GAGGCGCATT CCGGCATCGA AAAGCTGGTC AACAAAGTAC TGGCGATGGC CTGA
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| Protein sequence | MKNIAVLLAG CGVFDGSEIH ESVLTLLSLT KAGARFQCFA PDIPQLHVVN HLSGEVAKDE
HRNVLVEAAR IARGDIKATT ELNVADFDAL IIPGGFGAAK NLCNFALVGA DCDVAPEVRD
FIAEFALSKK PVGFICIAPV MIPKLYGKGA IGTIGHDKGT SEAFCIMGGD HRDASVHEIV
VDEANKIVST PAYMLAGNIA EAHSGIEKLV NKVLAMA
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