Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0090 |
Symbol | |
ID | 4602347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 100859 |
End bp | 101539 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639779402 |
Product | hypothetical protein |
Protein accession | YP_925972 |
Protein GI | 119773232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000869669 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.185327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGTT GCCCCCTGTG CCTCAAGCTG GACACCCAGT TATTTCATCA GGACAAAAAA CGCAGTTTCC ATCACTGTGC CACATGTGGA ATGGTGTTTG CCGACGGTGC AACACATTTG CCGCCTCAAG CGATTCGTCA GCGTTACGGG CGCGGTGGCA CCCAGGATAA TCAGCGCCAG CTATCGCCGT TTTTATTGTC ATTGCTTGAA CAAATCACCA GCCTGCATGG TACAGAGGTG CGGGGATTAA ACTACGGTCG GGTATTGGAT ACAGAGAGTC ACTGGCAACT TAATTCCGCT GGCCATGAGC TCAGCCAGTA CGACCCTTTT ACCGCGCCTG ATCCCGAAGC CCTGCAAAGC CAATACGACT TTATATGCTG TTTCAGGGTG TTCGAACATT TTGCTGCCCC CCACCGGGAA TGGCAGCTCT TTAACCGCTT ACTCAAAGCC GGTGGTTTTT TGGCCATCAG CACCAGGATG CTGACCAACC CATCACGCTT TGATAAATGG CACCATAAAA ATAACCCTGC CCATGTCAGC TTTCCCTGTC GGGAAACCTT CGAATATTTG GCTGCTGACA GTGGCTTTCG GCTAATATTT GCCGAAAATG ACTTCATCCT GATGCAAAAA CCATCGGGAT CTGATATAAA ACGCGACCCA AATTCATGCC CTGCCCTGTG A
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Protein sequence | MRRCPLCLKL DTQLFHQDKK RSFHHCATCG MVFADGATHL PPQAIRQRYG RGGTQDNQRQ LSPFLLSLLE QITSLHGTEV RGLNYGRVLD TESHWQLNSA GHELSQYDPF TAPDPEALQS QYDFICCFRV FEHFAAPHRE WQLFNRLLKA GGFLAISTRM LTNPSRFDKW HHKNNPAHVS FPCRETFEYL AADSGFRLIF AENDFILMQK PSGSDIKRDP NSCPAL
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