| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0081 |
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| Symbol | |
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| ID | 4602338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 89362 |
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| End bp | 90066 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779393 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_925963 |
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| Protein GI | 119773223 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAG CCAAGTTTGC CGAAATCAAA GAATACATAC GGCGCCACAT TGAAGCGGGC
GAATGGGAAG AAAATACCCG GGTGCCCTCG GAGAACCAGC TCGCCGAGCA GTTTGGCTGC
AGCCGTATGA CCGCCCGCCG CGCGCTGACT GAATTGGTTG AGGCAGGGGT GTTGGAGCGC
TCTCAGGGGC TAGGTACCTT TGTGGCGTCA CTCAAGTCCC AGTCAAGCAT GTTGTCTATT
CGCAATATCG CTGATGAAAT CAAGGGGCGC GGTCATGGCC ACAGTGTGCA GGTGGTGGAA
TTGGCCGCTA TCAATGCCAT CCCCCCGATC GCTATTGCCC TTGGGCTGGA GGAGGGCACT
GAAGTGTTTT ACTCATTGCT GGTGCATTGC GAACAGGGAA TACCCCTGCA ACTGGAGGAG
CGTTTTGTTA ATCCCAGTCT GGCGCCCGGG TATCTTAGGC AGGATTTCAG CCAACTGACA
CCCCATGAGT ATCTGTCGCA CGTCGCCCCG CTGACGGAGG CGCGTCATAC CATAGAGGCG
ATTATGCCTA AAGAGCAGAT CCGGAACAGC CTGAATATAC CCGAAGGCGA ACCCTGCCTG
CAGATCATCC GTCGTACCTG GTCCCGTCAG GGGGTAGTGA GTTTTGCCCG CTTGGTTCAT
CCCGGCAGTC GTTTTCGTCT TGGTGGCCAC CTTACCTTTA AATAG
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| Protein sequence | MATAKFAEIK EYIRRHIEAG EWEENTRVPS ENQLAEQFGC SRMTARRALT ELVEAGVLER
SQGLGTFVAS LKSQSSMLSI RNIADEIKGR GHGHSVQVVE LAAINAIPPI AIALGLEEGT
EVFYSLLVHC EQGIPLQLEE RFVNPSLAPG YLRQDFSQLT PHEYLSHVAP LTEARHTIEA
IMPKEQIRNS LNIPEGEPCL QIIRRTWSRQ GVVSFARLVH PGSRFRLGGH LTFK
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