Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0080 |
Symbol | |
ID | 4602337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 87909 |
End bp | 89147 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639779392 |
Product | imidazolonepropionase |
Protein accession | YP_925962 |
Protein GI | 119773222 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGG ATCAGGTTTG GATTGATATC AATATTGCCA CCATGGACCC ATCCATGAAC GAGGCTTATG GCGCCATTAC CGATGCGGCG CTGGCGGTAA AAGACGGCAA AATAGCCTGG CTTGGCAAGC GCAGCGACCT GCCCGAATTC GATGTGCTGG CCACCCCTGT ACACCGCGGC CATGGCGGCT GGCTGACCCC CGGCCTGATT GATGCCCACA CTCACCTGGT ATTTGCCGGT AATCGCGCCA ACGAATTTGA GCTGCGTCTG CAGGGCGCAA GCTACGAAGA AATCGCCCGC GCCGGCGGCG GCATTGTCAG CACAGTAAAA GCCTGCCGCG ACGCCGACGA AGCCGAGCTG TTTGACCTCG CCCGTCGCCG CCTGAATGCG TTGGCAAAGG AAGGGGTTAC CACGGTGGAA ATCAAATCAG GCTACGGCCT GGATTTGGAT ACCGAGCTTA AGCTACTGCG GGTTGCCCGC GAGCTTGGCC AGCACCACCA CGTGGATGTA GTCACCACCT TCCTCGGTGC CCATGCCGTG CCCCCTGAGT TCAAAACCCT GGGCGAAGCC GGAACCGATG CCTATGTGGA TCTGGTGGTC AACGAAATGC TGCCCGCCGT GGTGGCCGAG AACCTTGCCG ATGCCGCCGA CGTATTCTGC GAAAACATCG CCTTTAACCT AGAGCAAACC GAGCGGGTTC TGAGCGCCGC CAAAACTTTG GGGCTGGATA TCAAGCTGCA CGCCGAGCAG CTCAGCAACC TCGGAGGCAG TGAACTGGCC GCGCGTCTTG GCGCCAAGTC GGTTGACCAT ATCGAATACC TCGACGAAGC CGGCGTAAAG GCCATTGCCC AAAGCGGCAC CTGCGCCGTG CTGTTGCCGG GCGCCTTCTA CTTCCTGCGG GAAACCAAGC TGCCTCCCAT CGACCTTTTG CGTCAGTATC AGGTGCCCAT GGTGCTTGCC AGCGATTTTA ACCCCGGTTC ATCACCTATC TGCTCGACCC TGCTGATGCT GAACATGGGC TGCACCCTGT TCCGTCTGAC GCCGGAAGAG GCCCTTGCCG GCGTAACCCG TAACGCCGCC CGCGCCCTTG GCCGTGACCA GCGCGTGGGC GTGTTACGTG AAGGTATGGA GGCCGACTTC TGCCTGTGGC GTATCTCCAC CCCGGCGGAG CTGGCATACT CCTATGGCGT AAATCCACTG GTGGATGTGG TGAAAGGTGG CAGGCTAATT CATCAATAA
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Protein sequence | MSWDQVWIDI NIATMDPSMN EAYGAITDAA LAVKDGKIAW LGKRSDLPEF DVLATPVHRG HGGWLTPGLI DAHTHLVFAG NRANEFELRL QGASYEEIAR AGGGIVSTVK ACRDADEAEL FDLARRRLNA LAKEGVTTVE IKSGYGLDLD TELKLLRVAR ELGQHHHVDV VTTFLGAHAV PPEFKTLGEA GTDAYVDLVV NEMLPAVVAE NLADAADVFC ENIAFNLEQT ERVLSAAKTL GLDIKLHAEQ LSNLGGSELA ARLGAKSVDH IEYLDEAGVK AIAQSGTCAV LLPGAFYFLR ETKLPPIDLL RQYQVPMVLA SDFNPGSSPI CSTLLMLNMG CTLFRLTPEE ALAGVTRNAA RALGRDQRVG VLREGMEADF CLWRISTPAE LAYSYGVNPL VDVVKGGRLI HQ
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