| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0078 |
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| Symbol | |
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| ID | 4602335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 84659 |
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| End bp | 86656 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779390 |
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| Product | prolyl oligopeptidase family protein |
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| Protein accession | YP_925960 |
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| Protein GI | 119773220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGA TGATGACCAT AGTGCTATCG CTTATATGGA TGTGGGTGAG CCCCACCGCC
CACGCCTATA CGCAATTAAC AAAAGACGAC TTTATCAGTG ACCCTCTCAT CTACGACGCC
GAATTTTCAC CGGATGGTCG TTATCTGGCG TTTATTCGCC AGGCAGGTAA GAGCCGCGAT
GTTGTCATCC GGGACTTTTC TCAGGAAGGG GCGCCTATCA CCGGGATATT GCAGGATGAA
TTTATTCGCG CCGACTCTAT TAGTTGGGCA AATAACACTC GGGTGATTGT GAATCTGATG
GTGCCCTACG AGCGTATCTC CAAATTAAAA AAGAAGGCGG AGAAAGACCC GGAGTTCGAC
CTCGATGAGT ACGATTACTT CAGGCGTTCC ATTTCCATGG ATGTGCACTG TCAGGATAGG
GTGGTGCTGC TCAACCATAA AAAATACAGC CGCAAAAACT TAAACCTGTC CAGAGTCAGT
AACCTGCTGG TGGATGACGA GCAGCATATT CTTATGCCCG CCTGGGGCCA TAAAGGCCTC
GAAATCATGA AAGTGAATGT GTACACGGGG AAGGGTGAAG TGGTGCTGGA GGGCGGAAGG
CGCACCTACA ACATTTTAAC CGACAAACAG GGCCAGCCTA CGTTCAGGCT GGACTATTAC
TATTACAGCC GCAGTGTGCA AGTGTACGAA TACACTCAGG AAGGCGAATG GGTTCCCATC
GACCGTATCT ATTTCGAGCA AAATGAAGAT GGCGAATTCG ACTTTGAAGG CTTGGTAGGT
ATTGGTAAGG AAGGCGAGCT GATATACCGC AAGCGCAATG AAACGAGCGG CTATTATGAA
ATCGTCAAAT ATAAAAAAGG CAGCAAAGAG AAGCAGGTTG TCGCCTCGCT GCCTGAAGAA
GATATTTACT CTCCCATGTT TGACGCCTTC ACCGGCGAAT ATCTGGGTTA CCAGGTGCAG
CGGGACCTCA TCCGTAATGT GTATTTGGAT AAGAGTTATC AGGCCCACTA CGACAAGGTG
GCTGAAGACA TAGGGCACAG CAACTTCTCT TTCTGGGCTT CGAGCACCAG TAAAAACCGT
GTGGTGGTAA AAAGCAGCGG TGCAGACCAT CTGGGCAAAT TCTATGTTTA CGACTACAAG
ACCCAGGCCC TGACATGGCT GGGGGATGTA CATAATCAAC TGGTGCCCGA GAATCTCGGG
TTGCCCGCCA AGGTGAATTA CAGTACCAGA GACGGGCAAA AGCTGCGTAT GTACCTGCTA
TTCCCACCCA ATTATGACGA CACCAAAGCC TACCCTATGG TGGTGTTACC CCACGGCGGC
CCACAATCCC GTGACAGTGC CAGCTTTGAT TTCTTCGCCC AGTTCATTGC TACCCGGGGT
TATATCGTCA TACAGCCAAA CTTCCGCGGT TCTACCGGTT ATGGACTGGA ATTTGAGAAA
GCTGGCTACA AACAGTGGGG ACAGCGGATG CAGGACGATG TGTCAGACGC CGTCACCTAC
ATGACCCAAA ATGGCTACGC GGATAAGTCC AGGGTGTGCA TTGTGGGGGC CTCCTATGGT
GGTTATGCCG CGCTGATGGG CGCCATTAAA ACCCCTGAGC TGTACCGTTG CAGCATCAGT
ATTAACGGGG TGACCCACCT TAAAGATCAA ATCGCGTTTG ACGTGGATTC CGCAGAAATA
AACGAAGACA GAATTGAAGA GATACTCTAC GAACGCATTG GTCATCCCAT CCGGGACGCC
AAAATGTTGG ATGACAATTC ACCGGCGTTA CTTGCATCAA AAGTGAGCTT ACCACTGCTG
ATTATCGCCG GAGACAGCGA TCAAATCGTG CCCTACACCC AGGCTGAAGT CATGGTTGAG
GCACTGGCGA AGTCGAAGAA AGACTTTAAG TTTGTCGAAC TGACAGACAC AGGCCATAAC
CCCTTTATCC TGAAAGACAG CGCCGCCAAG GTGTATCAGG AAGTTGAGCA GTTCCTGAAA
ACTCACCTTG GGGAATAG
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| Protein sequence | MKVMMTIVLS LIWMWVSPTA HAYTQLTKDD FISDPLIYDA EFSPDGRYLA FIRQAGKSRD
VVIRDFSQEG APITGILQDE FIRADSISWA NNTRVIVNLM VPYERISKLK KKAEKDPEFD
LDEYDYFRRS ISMDVHCQDR VVLLNHKKYS RKNLNLSRVS NLLVDDEQHI LMPAWGHKGL
EIMKVNVYTG KGEVVLEGGR RTYNILTDKQ GQPTFRLDYY YYSRSVQVYE YTQEGEWVPI
DRIYFEQNED GEFDFEGLVG IGKEGELIYR KRNETSGYYE IVKYKKGSKE KQVVASLPEE
DIYSPMFDAF TGEYLGYQVQ RDLIRNVYLD KSYQAHYDKV AEDIGHSNFS FWASSTSKNR
VVVKSSGADH LGKFYVYDYK TQALTWLGDV HNQLVPENLG LPAKVNYSTR DGQKLRMYLL
FPPNYDDTKA YPMVVLPHGG PQSRDSASFD FFAQFIATRG YIVIQPNFRG STGYGLEFEK
AGYKQWGQRM QDDVSDAVTY MTQNGYADKS RVCIVGASYG GYAALMGAIK TPELYRCSIS
INGVTHLKDQ IAFDVDSAEI NEDRIEEILY ERIGHPIRDA KMLDDNSPAL LASKVSLPLL
IIAGDSDQIV PYTQAEVMVE ALAKSKKDFK FVELTDTGHN PFILKDSAAK VYQEVEQFLK
THLGE
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