Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0077 |
Symbol | |
ID | 4602334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 82839 |
End bp | 84014 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639779389 |
Product | MerR family transcriptional regulator |
Protein accession | YP_925959 |
Protein GI | 119773219 |
COG category | [K] Transcription [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0789] Predicted transcriptional regulators [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGC GTATTTCACA ACTGGCACAA AAGTTCGGAT TATCGCGATC GACCCTGCTG TATTACGAGA AACAGGGGCT TATCCGCGGC AGACGATTGG ATAACGGCTA TCGGGTATAC AGCGAAAATG ACCTGCAGCG ACTGATCTTG ATCCAAAAGC TGCAGGCGGG CGGTCTCACC TTAAAAGAGT GCCTGGCCTG CCTCGATGCA CGCATTGACA AAGCGCTGCT GCAAACCCGG CTTGCCGAGC TGGACGCCGA CATTGCCCAA AAGCAGGCTT CGCGGACTTT GCTGGCAGCC CTTCTGGGCG AAGGCGATTT GAAGGCGTGG CACGAGTCCC TCACAAAGGA AGCGCCCGAG GCGCATCTGG ATTGGTTACA AACCCAGGGC TTCAGCGAAA AAGAAGCGCT GCACCTGACA TGGCTATCTA AAGATATGAA CGAACACGAC AAATTTATGG CCGACTTTAT GCAGATTTTC TCCCCGCTGA CACGCTGGGC GCCGGGCAGC GAGGCCGACA CCTTAAAAGC GCTGGCATCC GTGCCGCTGA CGCCAACACG GATTCTCGAC ATAGGCTGCG GCAAAGGCCT TGCGACCCGA ATGCTGGCGA AGCACACGAA AGCCAGCATC ACCGCCATCG ATAACGAGGA AGACGCCCTC ACTGAGCTGC AACAGCACCT TCAGCACCGC AATCTGGCCA GCCGGGTCAG CACCCTGTGC GCCAGCATGA CGGACATACC ACTACCGGCG GCGAGCGCCG ATCTTATTTG GGCCGAAGGC AGCGCTTATA TCATGGGGGT CGAGCAGGCG CTCAAGTCAT GGCGTAAGTT GCTGGTCGAT AACGGCGTGC TGGTCCTCAG CGATCTGGTG TGGCTGACAG ACGACAAAGC ACCTGAGGCC GTGGCCTTCT GGCAGCAGGA CTACCCCGCC ATGACCTCAG TCGAGGCGAG AATGGCGCAA ATGCAGGCGG CGGGTTTTGA GGTTATTGAC AGCTTCAGCC TCAGTAATGA GGCCTGGAAG AGCTTTACCG GCCCACTGGC AGCGCGGGTG GATGAGGTTT CAGAGCAGCT GGCAGGCTCG CAGGCGTTAG CCAATGTGCA GCGGGAGCTT GGTATTTTCA GCCGCTTCCT CGGCCAGTTT GGCTATCAGT TCTTCGTGCT GCAAAAACGG GGTTAA
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Protein sequence | MTLRISQLAQ KFGLSRSTLL YYEKQGLIRG RRLDNGYRVY SENDLQRLIL IQKLQAGGLT LKECLACLDA RIDKALLQTR LAELDADIAQ KQASRTLLAA LLGEGDLKAW HESLTKEAPE AHLDWLQTQG FSEKEALHLT WLSKDMNEHD KFMADFMQIF SPLTRWAPGS EADTLKALAS VPLTPTRILD IGCGKGLATR MLAKHTKASI TAIDNEEDAL TELQQHLQHR NLASRVSTLC ASMTDIPLPA ASADLIWAEG SAYIMGVEQA LKSWRKLLVD NGVLVLSDLV WLTDDKAPEA VAFWQQDYPA MTSVEARMAQ MQAAGFEVID SFSLSNEAWK SFTGPLAARV DEVSEQLAGS QALANVQREL GIFSRFLGQF GYQFFVLQKR G
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