| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0075 |
|---|
| Symbol | |
|---|
| ID | 4602332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 80333 |
|---|
| End bp | 81535 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779387 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925957 |
|---|
| Protein GI | 119773217 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAA TCATCACTTT ATTGCTTGGC AGCTTGCTGA GTGTTTGTGC TCTTTCGCCA
CAGGTTCAGG CGGCAGCACG CCTTTCGTCA GACTCGATTG AGATTCGCTC GCCGCTGCTG
GGGGATGAGC CCGCCACCTT TACTATCACC TTGCCTGCAA ACTATGGCGA AGATAACACC
CAGAAATACG TGCTGATGCT CGACTGGCAC CCCCGCGCAC AGCCGCTGCT GGCAGGAATG
CAGGACTGGA TGAGTCACAA TGGAGGCTGG CCGTGGGTGG AAACCATAGT GATCACTCCG
CCCAATGGCC ATCAAGGCTT GGGCAAGCTT AAATCGGCAG CCATTGAAAC CGGTGATGAA
GCTCTGCTGG ATTTCGTTGA ACGAGCACTG CTTCCCGCCA TTGAGGCCAA ATACCCAACC
AATGGCTTTA AGATAGTCAG CGGCTTTACC GGCAATGGCG GCCTGGTGTT GCACGCATTG
CTCAGGCGGC CTGCGCTGTT CAACGCTTAT ATCGCCATCA GCCCGGTGCT GAGTGAAGAC
TTTGCCAAGG TGTTGTCGCA GGCGAAAAAC CGGCTTAAAG GCCTGGATAA ATCCCTTGCC
GGCAAGACCC GCTTTTTGCA ACTCTCCACC AGTGACAGCG ATTTTGAGCG TGGCGAGCTG
GACGCCTTCG CCGAGCTGGA AGCTGTGCTC AAGGCCAATG CGCCAGCCAG CCTTAAGTGG
CAAAGCCTCA GGTTCGATGG CAGCTATTAC ATGACTCAGC CGGTGCTGGG CGTGGCCCGT
GGCATAGAGT TTGTGTTTGA CGAGGTGCAT AAGCCTCTGG CTGCCGACAG CGCCATCAGT
CGGCAGGGTG TAGCCGCAAT CCTTGCGCAT TACCTGCGTC TGTCCAGGGA GGTTTATGGC
TTTGATGTCT CAGCTGAGGG GGCCTTGATA GCGCTGGCCA AGGCCTCGTT GCCGGACGCA
CCGCAACGGG CGATGGCGGT GCTGACCGAG TCTGTTACAG CATTGCCGGG CAATCACAGC
CTTAAGTTTG AGCTTGCCAC CATCCAGGCA TCCTTGGGGA AAAACAAGGA TGCAGCCGGG
CAGCTTGAGC AGGCGCTGAC GCTGACCAAT CATCCCTTCT GGCAGCGTCA TTACCAGCGA
ATGCTGATTC AGCTCCGGGC AAGCAGGGAG GGCGAATCGG TTCGGCTGAG CTTGCGAGAC
TAA
|
|---|
| Protein sequence | MRIIITLLLG SLLSVCALSP QVQAAARLSS DSIEIRSPLL GDEPATFTIT LPANYGEDNT
QKYVLMLDWH PRAQPLLAGM QDWMSHNGGW PWVETIVITP PNGHQGLGKL KSAAIETGDE
ALLDFVERAL LPAIEAKYPT NGFKIVSGFT GNGGLVLHAL LRRPALFNAY IAISPVLSED
FAKVLSQAKN RLKGLDKSLA GKTRFLQLST SDSDFERGEL DAFAELEAVL KANAPASLKW
QSLRFDGSYY MTQPVLGVAR GIEFVFDEVH KPLAADSAIS RQGVAAILAH YLRLSREVYG
FDVSAEGALI ALAKASLPDA PQRAMAVLTE SVTALPGNHS LKFELATIQA SLGKNKDAAG
QLEQALTLTN HPFWQRHYQR MLIQLRASRE GESVRLSLRD
|
|---|
| |