Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0064 |
Symbol | |
ID | 4602321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 69152 |
End bp | 70345 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779376 |
Product | hypothetical protein |
Protein accession | YP_925946 |
Protein GI | 119773206 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAGT GCAAGCATCA TCAGGTCATC ATTATCGGCG CTGGAGCTGC GGGGCTTATG TGTGCCCTGA CGGCAGGTTA CCGTGGCCGG GATGTGCTGC TGCTGGACAA CGCCAAGCAG CTTGGGCGTA AAATTCTTAT CAGTGGCGGT GGGCGCTGTA ACTTCACCAA TCTGCAAACC CAGCCTTCGG CATATCTCTG TGCCAACCCA CACTTTGTAA AATCGGCTCT GGCGCGCTTC ACCCAGTGGG ATTTTATTGC CATGGTGGAG CGCCACGGTA TCGCCTATCA CGAAAAGACC CTTGGGCAGC TGTTTTGCGA TGAGTCGGCC AAAGAGATAG TGGAGATGCT GACCACGGAA TGTGACTGGG CTGGCGTAAA GATTCAACTG CGCACCGAGG TGCTTACCGT GAGCAAAACG GAAACCGGCT TTGAACTGCA CACCAGCGAA GGCCACTTCA GCTGCGAGTC TCTGGTGATT GCAACCGGCG GCTTGTCGAT GCCAAAGCTT GGTGCGACCC CCTTCGGTTT CAAGCTGGCG CAGCAGTTTG GTTTGCGGGT GCTGCCTACG ACCGCTGGCT TGGTGCCCTT TACCCTGCAG CCGGAAGACA AGAGCCACTT TGAGTGTCTG GCCGGGGTGA GTTTGCCGGT GACTGTTACC TCGGCTTCTG GCCAGTCCTT CTCAGAGGCG CTGCTATTTA CTCACAGAGG GATTTCCGGG CCTGCCATAT TGCAAATCTC TTCATACTGG AAACCGGGAG AAGCTGTGAG CATAGATCTG TTGCCCGGAT TGAACTTTGT CGATTGGTAC AAAACAATCA GTATTGAATC ACCAAAATTG TCAATCAAGA ATGCGCTATC TCGATTGCTG CCGAAACGGT TTGTGGAGCG GTTACAGGAA ATAGGTGCCA TTCCAGATAA GGCACTGAAT CAGTTTTCCA AGGCGGAAGT GGAGGCCTTG GCGGACTATT TTGCCAACTG GTCCATCGCT CCAGGTGGCA CTGAGGGTTA TCGCACAGCC GAAGTGACTC TGGGGGGCGT CTGTACCGAT GAACTCTCTT CCAAAACGCT GGAAGCCAAG GCCTGCAAGG GGCTCTATTT CATTGGGGAA GTGGTTGATG TTACCGGCTG GCTCGGCGGC TACAATTTTC AATGGGCGTG GAGCTCAGGT CATGCTGCAG GGGAGGCTGT TTAA
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Protein sequence | MSECKHHQVI IIGAGAAGLM CALTAGYRGR DVLLLDNAKQ LGRKILISGG GRCNFTNLQT QPSAYLCANP HFVKSALARF TQWDFIAMVE RHGIAYHEKT LGQLFCDESA KEIVEMLTTE CDWAGVKIQL RTEVLTVSKT ETGFELHTSE GHFSCESLVI ATGGLSMPKL GATPFGFKLA QQFGLRVLPT TAGLVPFTLQ PEDKSHFECL AGVSLPVTVT SASGQSFSEA LLFTHRGISG PAILQISSYW KPGEAVSIDL LPGLNFVDWY KTISIESPKL SIKNALSRLL PKRFVERLQE IGAIPDKALN QFSKAEVEAL ADYFANWSIA PGGTEGYRTA EVTLGGVCTD ELSSKTLEAK ACKGLYFIGE VVDVTGWLGG YNFQWAWSSG HAAGEAV
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