| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0063 |
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| Symbol | gpsA |
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| ID | 4602320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 68062 |
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| End bp | 69081 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779375 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_925945 |
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| Protein GI | 119773205 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA CTGCCGATAT TACGGTACTG GGGGCGGGCT CTTATGGCAC CGCCCTTGCC
ATTTCTTTGG CCAGTAACGG ACACAAGACT TTGCTGTGGG GTCATGACCC CGAGCATATC
GCCACTCTCA GCCGCGAGCG CTGCAACGCC GCCTTTTTGC CCGGAATAAG CTTCCCAGAT
TGTTTGGTGA TGGAGGCCGA TTTAGGCAAG GCGCTGGCCG CATCGCGCAA CGTGTTGGTG
GTGGTTCCGA GCCATGTGTT TGGTGATGTA TTGCGTCAGG CCAAGTCTTT GCTCCGTGCC
GATGCCCGTA TCGTATGGGC CACGAAAGGC CTGGAGCCTG AAACTGGCCG CTTGCTGCAG
GATGTCGCCC GCGATGCATT GGGTGATGCT TTCCCGCTGG CGGTTTTGTC TGGCCCCACC
TTTGCCAAAG AGTTGGCCGC TGGCTTGCCA ACAGCAATAT CGGTTGCAGG CACAGATGCC
GGCTTTACCG CAGATTTAGT GGAGTTACTC CATAGCCCCA AACGCCTTCG GGTGTATGCC
AATGACGACT TTATCGGCTT GCAACTGGGA GGCGCAGTCA AAAACGTGAT TGCCATCGGC
GCCGGTATGA GTGACGGCAT AGGCTTTGGT GCCAACGCCC GTACAGCGCT CATCACCCGT
GGTTTGGTTG AACTCAGCCG CCTCGGCGAG GCTCTGGGTG CCCAGCAGGC GACCTTTATG
GGGATGGCCG GTCTTGGGGA TCTGGTGCTG ACCTGTACCG ACAACCAGTC GCGCAACCGT
CGCTTTGGTT TGGCTCTGGG CAAGGGCTGT GATGTGAATA CCGCCCAGAG CGAAATCGGT
CAGGTGGTTG AAGGTTATCG CAACACCAAG GAAGTCTTCA CTCTGGCGAA ACGTCTTGGG
GTTGAAATGC CCATCACAGA GCAAATCTAC GCAGTACTTT ACCAGGGCAA ATCCCCGCTG
GATGCCGCCA AAGAATTATT GGCCCGCGAG AAAAAATCCG AGACAGCTGC GGCCGATTAA
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| Protein sequence | MKDTADITVL GAGSYGTALA ISLASNGHKT LLWGHDPEHI ATLSRERCNA AFLPGISFPD
CLVMEADLGK ALAASRNVLV VVPSHVFGDV LRQAKSLLRA DARIVWATKG LEPETGRLLQ
DVARDALGDA FPLAVLSGPT FAKELAAGLP TAISVAGTDA GFTADLVELL HSPKRLRVYA
NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELSRLGE ALGAQQATFM
GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVNTAQSEIG QVVEGYRNTK EVFTLAKRLG
VEMPITEQIY AVLYQGKSPL DAAKELLARE KKSETAAAD
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