| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0058 |
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| Symbol | |
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| ID | 4602315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 62780 |
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| End bp | 63976 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779370 |
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| Product | C-terminal processing peptidase |
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| Protein accession | YP_925940 |
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| Protein GI | 119773200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.871061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT TCATCCGTTA TCTCGGCGCG ACGGTGTTCG GTTTGGCGCT GGGCATTTCC
GTAAGCCTCT CCGGGCAGGA AAACGCCCGC TCGGTGCTCA GCCAATATGA CTACCCTCTG
CTGGTAGACA TTATGGATAC CATTGAGACC TACTATGTGA ATCAGATAAG CAGGGATGAA
CTTATCGAAG GTGCCATCGA GGGCATGTTC AAAAAGCTCG ACCCCTACTC GGGCTACCTG
TCTCATCAGG ATCTGATCAA TATCCGCGAT ACAAACCGGG GGGAATATTT CGGCTACGGC
TTCGAAATCG CGTCTGACGA TAACCTCATC CGTATTGTGT CACCTTTTTC CGACTCTCCC
GCTGACAAAG CCGGCATTAT CGCTGGCGAT ACCATTATCG CCGTCAACTC GCACCAAGTG
GCTGACATGG ACCTCAATGC CGTGCTCGCT GAAATCCGCT ACCACAGTCT GAATAACCTG
CCGCTAACCC TGACTCTGGA ACACAGTGAC AAAATCAGCT ATCAGGTCAC CCTGAGGCCT
GCGACCATTT CAGTTGCGTC AGTTCAGGGA CGTTGGTTAG AGGGTGAAAT TGCCTACGTG
CGGCTCACCA GCTTCCAGGA CAACACCACA GAAGATCTGG TAAAGCAGCT CAGCCAATGG
AATTCGCCCA AGGGACTTAT CCTGGATTTA CGCAATAACC CGGGTGGCCT GCTGGACCAA
GCCATCAGAA TTGCGGACCT GTTTCTGGCA AAGGGGCGCA TAGTCTCAAC CTCAGGACGC
TACTTCGATG CGAATTCTGA CTACTTCGCC TCGCCCCAAA CCCTGATGAC CAATGTGCCC
ATGATGGTGC TTATCAATAA GGGGTCTGCC TCGGCTTCGG AAGTGCTTGC TGCGGCGCTG
CAGGAAAATG GCAGGGCTCT GCTTATCGGT GAGACCAGCT TTGGCAAAGG CACAGTACAA
AGTCTTATCC CCACCCTTAA CATGGACAGT GCAATAAAGT TGACCATAGC CCATTACAAC
ACCCCAAAAG GCCATGATAT TCATGCCAAA GGGATAGAGC CTGATATTAA AATTGCCGCT
CAGAATACTG TTAAAGATGC GGGTGATATG CCTATAATCG GCTCAGAACA ACGTAAAACA
CAACTTGAAG ATCAGACCTT GGCATCGGCC ATCGCCTGGA TTGAAAACCA AAAATAA
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| Protein sequence | MKQFIRYLGA TVFGLALGIS VSLSGQENAR SVLSQYDYPL LVDIMDTIET YYVNQISRDE
LIEGAIEGMF KKLDPYSGYL SHQDLINIRD TNRGEYFGYG FEIASDDNLI RIVSPFSDSP
ADKAGIIAGD TIIAVNSHQV ADMDLNAVLA EIRYHSLNNL PLTLTLEHSD KISYQVTLRP
ATISVASVQG RWLEGEIAYV RLTSFQDNTT EDLVKQLSQW NSPKGLILDL RNNPGGLLDQ
AIRIADLFLA KGRIVSTSGR YFDANSDYFA SPQTLMTNVP MMVLINKGSA SASEVLAAAL
QENGRALLIG ETSFGKGTVQ SLIPTLNMDS AIKLTIAHYN TPKGHDIHAK GIEPDIKIAA
QNTVKDAGDM PIIGSEQRKT QLEDQTLASA IAWIENQK
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