| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0056 |
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| Symbol | |
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| ID | 4602313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 61576 |
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| End bp | 62031 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779368 |
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| Product | Rrf2 family protein |
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| Protein accession | YP_925938 |
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| Protein GI | 119773198 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0941015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTGA CCCGCTATAC GGATTTTGGG ATTCGCACCC TGATGTATAT GGCTGTTCAA
CCTGAGCGGA CAGCCCTGTT CCGGATTGCC GAGATCACTG AAGTATTTGA TTTGTCGCCC
AACCATGTAT CCAAAATTAT TCATCATCTG GGTAAAGCCG GTTATTTGCA GACCGTCAGG
GGCAAGGCTG GCGGGTTTAG GCTTGCCAAG CCTGCAGCAG AGATAAACCT TGGTGCATTG
GTGCGCGAGC TGGAGCATTC CTTAGCGCCG ATCAATTGCA GCAAACCCGT TTGCAGATTG
CTCCCAGCCT GCCAGTTAAA GGGAGTATTG GCGAATGCGG TGCAGGCATA TCTGGCGGTG
CTGGATCAGT ACCAGTTGGC GGATATAGTG ACAAACAGGG ATGAACTGTT GGCGTTGTTG
CCGGACTCGA CTATTTCAAT CTTACAGCTG GGCTAG
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| Protein sequence | MQLTRYTDFG IRTLMYMAVQ PERTALFRIA EITEVFDLSP NHVSKIIHHL GKAGYLQTVR
GKAGGFRLAK PAAEINLGAL VRELEHSLAP INCSKPVCRL LPACQLKGVL ANAVQAYLAV
LDQYQLADIV TNRDELLALL PDSTISILQL G
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