Gene Sama_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0051 
Symbol 
ID4602308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp53477 
End bp53908 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID639779360 
Productglobin 
Protein accessionYP_925933 
Protein GI119773193 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.294967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0701367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA TAAAGAAGAT ATTTCGCCAA CAGCCTCAGG ATGACCGAGA TCCGAGTCAG 
TCTAACGCTT ATGAAATGAT AGGCGGTGAC GAAACCATAC GTGCCATCGC AAAGCAGTTT
TACGCCCGTA TGCAGCAAGG CGAAGACACC CAAAAGCTGC TGGCGATGCA CCCGGGGCCA
ATCGAGCAAT CAGAACAAAA GCTTTATGAA TTTTTGAGCG GCTGGCTCGG CGGACCTCAG
CTGTTTCAGC AAAAGTATGG CCATCCGGCA CTGCGTGCCA GACACCTGCC CTTCGCCATT
GATGAACAAA TGCGGGATCA GTGGCTGACG TGTATGCAGT ATGCGCTGGA ACAGGAAGTA
GCAAATGAAC AGCACCGCGA GGTGATCTAC CAGGCTATTG CCACCCTGGC AGACCACATG
CGTAATCAAT AG
 
Protein sequence
MNWIKKIFRQ QPQDDRDPSQ SNAYEMIGGD ETIRAIAKQF YARMQQGEDT QKLLAMHPGP 
IEQSEQKLYE FLSGWLGGPQ LFQQKYGHPA LRARHLPFAI DEQMRDQWLT CMQYALEQEV
ANEQHREVIY QAIATLADHM RNQ