| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0041 |
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| Symbol | |
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| ID | 4602298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 44805 |
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| End bp | 46088 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779350 |
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| Product | sun protein |
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| Protein accession | YP_925923 |
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| Protein GI | 119773183 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.15586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC GAGCCCTCGC CGCCAAGGCG ATTTTCGATG TGCTGGAGCG TGGCGTGTCT
CTGTCGGTGG CTTTGCCTAC CCAGCAACTT TGGCTTCGTG ACGGAAAAGA CAAGGCTCTG
CTTGCTGAAA TCTGTTATGG CGTCATGCGC AGCCTGCCTC AGCTCGACAA GCTGGTCAGT
GGTTATATGC AAAAGCCCCT CAAGGGCAAA CAGCGTGTTG TCCACCAGCT GCTATTGGTG
GGTGCCTATC AGCTGTATTT CACCCGGGTG CCGGCCCACG CCGCCATTTC CGAAACCGCC
GAAGGCTGTC GCGCCCTCGG CTTCGAGAGT CTGGTAAAGG TGGTCAACGG GGTGCTGCGC
AATATTCAGC GTCAGGTGCC GCCTTTGGAT GAGTCCAACG ACACCTTGAA GTATAACTTT
CCGGCCTGGA TAATCCGTCG CCTGAAAGAC GCCTACCCGG AAACCTGGGA AAACATCATA
GAGGCGTCAC ACCAACGTCC ACCCATGTGG CTTAGAAACA ACCGCCGCCA CCAGAGCCGT
GATGCGTATT TGCAGGCGCT TAGCGATGCT GAGGTAAGTG CCGTTGCGGG TCCGGGTGAA
GATGCCATTT GCCTCGAATT TGCCACCGAC GTTGCCCGCC TGCCGCATTT TGCCGATGGC
GCCAGTTCGG TGCAGGACGG CGCAGCCCAG TGGGCCGCAA GCCTGCTGGC CCCCCGAGAT
GGAGAACTGG TACTGGATGC CTGTGCGGCG CCCGGCGGTA AAAGCTGTCA TCTGCTGGAG
CTTGCCGACA TCGAGCTGGT CGCCGTAGAT TTCGACCAGA AACGCCTCGA GCGGGTGTCA
CAAAACCTCG AGCGACTCAA ACTTGATGCC AGGGTCATTC ACGGCGATGC CGGGGATATC
GGCAGTTGGT GGCAGGGCGG CAAGTTTGAC CGCATCCTGC TGGATGCGCC CTGCTCTGCG
ACTGGCGTCA TCCGCCGCCA TCCGGACATC AAATGGCTCA GACAAAACAA CGACATTGCC
GAGCTTGCCA AACTTCAGCA GCAAATTCTC GACAACTGCT GGCAGTGGCT TAAGCCTGGT
GGCACACTGC TGTACGCAAC CTGTTCTATT TTGCCTGAAG AAAACCGTGA GCAGATCAAG
GCTTTCCTCG AACGCACCCC AGATGCGACC CTGGAAACCC TGCCCAATCA GGCAAACAAT
AACGATATTG GCTGGCAAAT CCTGCCGGGA CAGGACGACA TGGACGGGTT TTATTACGCC
CGCCTGAAAA AAGCGCTGGT TTAG
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| Protein sequence | MNIRALAAKA IFDVLERGVS LSVALPTQQL WLRDGKDKAL LAEICYGVMR SLPQLDKLVS
GYMQKPLKGK QRVVHQLLLV GAYQLYFTRV PAHAAISETA EGCRALGFES LVKVVNGVLR
NIQRQVPPLD ESNDTLKYNF PAWIIRRLKD AYPETWENII EASHQRPPMW LRNNRRHQSR
DAYLQALSDA EVSAVAGPGE DAICLEFATD VARLPHFADG ASSVQDGAAQ WAASLLAPRD
GELVLDACAA PGGKSCHLLE LADIELVAVD FDQKRLERVS QNLERLKLDA RVIHGDAGDI
GSWWQGGKFD RILLDAPCSA TGVIRRHPDI KWLRQNNDIA ELAKLQQQIL DNCWQWLKPG
GTLLYATCSI LPEENREQIK AFLERTPDAT LETLPNQANN NDIGWQILPG QDDMDGFYYA
RLKKALV
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