| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0038 |
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| Symbol | |
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| ID | 4602295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 41376 |
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| End bp | 41927 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779347 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_925920 |
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| Protein GI | 119773180 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.142009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGA CTCAGCAGCG TCAACATTTG CTTATTTATT TCTCCCGCGG TGGTCACACC
CGAAAGATTT CTGAGGCAAT TGCGGCCCGA TTAAAGGCAT GTGGGCATGG TTGTACTTTA
ATGTCGGTAA GCGATGCACT GCAAAATCCG CCGGATTGGG AAGCGTTTGA CGTGGTCGCG
CTGGGTGCCT GTGTCCTCTA TGGCTCGTAT GACAAGTCAG TATTTGAGTT GGTCGACCGG
TATGGCGGGG TGCTCTCCAG CAAGGTATCC AGTTTTTACT GTGTCAACGT TGTCGCCAGG
AATCCGGAAA AACGTATTCC TGAAAACAAC AAGTATCTGC AGAAGTTTCT GGCCCTGTCG
CCCTGGCAGC CCGGGGATTT GAAAATTATT GCGGGGAAGG TGGATTATCC GGCCTGGCCC
TGGTACGACG CTTTGATGAT CCGTCTTATC ATGAAGATGA CCAATGGCCC GACCGACCCC
AAGGCGGTCA TAGACTACAC AGACTGGCAG GATGTCGACG CCTATGCCGA CCATCTGGCA
ATGCTGAAAT AA
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| Protein sequence | MPQTQQRQHL LIYFSRGGHT RKISEAIAAR LKACGHGCTL MSVSDALQNP PDWEAFDVVA
LGACVLYGSY DKSVFELVDR YGGVLSSKVS SFYCVNVVAR NPEKRIPENN KYLQKFLALS
PWQPGDLKII AGKVDYPAWP WYDALMIRLI MKMTNGPTDP KAVIDYTDWQ DVDAYADHLA
MLK
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