Gene Sama_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0037 
Symbol 
ID4602294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp40878 
End bp41186 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content49% 
IMG OID639779346 
ProductArsR family transcriptional regulator 
Protein accessionYP_925919 
Protein GI119773179 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.139091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGA ATATTGATGT AAATGCCATG GTAGGTAACG CAGAATCCGC AGCCAAGTGG 
CTCAAAGCCA TTGCCAATCC TTATCGGCTG ATGATCCTGT GTCTGCTGCT GGACAATGAG
ATGAGCGTTA CCGAGCTCAA TGAAATAGTG CCCTTGAGCC AATCGGCGCT GTCTCAGCAT
CTGGCCGTAC TCAGGGCTGA AGATCTGGTT GATACCCGCA AGAGCTCGCA GCTGGTCTAC
TACAAGCTCA AAAACGAACA GGTCACTGAA ATTATCTCAA TCCTGCACCA ACGCTATTGC
AGCGTTTAA
 
Protein sequence
MQPNIDVNAM VGNAESAAKW LKAIANPYRL MILCLLLDNE MSVTELNEIV PLSQSALSQH 
LAVLRAEDLV DTRKSSQLVY YKLKNEQVTE IISILHQRYC SV