| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0035 |
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| Symbol | |
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| ID | 4602292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 38875 |
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| End bp | 40332 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779344 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_925917 |
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| Protein GI | 119773177 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.161257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.16596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACA GAACAATAAT AAGGATCACC GGCCTGTTGA TGGGGTTGTT TTCCATCACC
ATGTTGCCAC CGGCGCTGGT CGCTATCTAT TACAAAGATG GCGGCGGTAC TGCATTTATT
CAGGCCTTTG TGGTGAGTCT GATCCTGGGC TTTATTTTTT GGTATCCCAA TCGCAAGCAT
AAGTCGGAGC TGCGCACCCG CGAAGGCTTC CTGATTGTGG TGCTGTTCTG GACGGTTCTG
GGGTCTATCG GTGCTTTGCC ATTTATTTTC TCATCCACAC CGGATTTAAG CTGGACCGAT
TCCTTCTTTG AGTCTTTTTC GGCGCTCACC ACCACGGGAG CGACCGTGAT TGTGGGGCTC
GACAGCCTGC CCAAGGCAAT TCTGTTCTAC AGGCACTTGC TGCAGTGGTT GGGGGGGATG
GGGATCATCG TGCTCGCGGT AGCCATCTTA CCCGTGCTTG GTATCGGTGG CATGCAGTTG
TACCGCGCCG AAATTCCCGG TCCGGTCAAA GACAGCAAAA TGACTCCGCG CATCGCCGAG
ACCGCCAAGG CGCTTTGGTA CATTTACCTG CTACTTACCA TTGCCTGTGC CACAGCCTAC
TGGGCCGCGG GCATGTCAGT ATTTGATGCG ATTTGCCACT CGTTCTCCAC CATTGCCATC
GGTGGTTTCT CTACCCACGA TGCCAGTATG GGGTATTTCG ATAGTCCGAC CATCAATATG
ATTTGTGTCG TATTTTTGAT TATTGCCGCA GTGAATTTCA GTGTGCACTT TGCCGCCATG
AGCCGCAGGG GCATCAACCT CAGGGTGTAT TTCCGTGACA CCGAATTCAA GATTCTGGTC
GCGATTCAGC TGCTATTAAC CGCCATCTGT TTTGCGACGC TCTACCATTC AGGAATTTAC
GACTCGCCGG AAGAAACCTT CGATTACGCG CTGTTTCAGG CGGTGTCTAT TTCCACGACT
GCAGGTTTCG GCACCGAGAG TTTCCACCTA TGGCCGCTGT TTTTGCCCAT GTTGCTGATT
TTTTCAAGCT TTATTGGTGG CTGTGGTGGC TCTACCGCAG GGGGGATCAA GGTTATTCGG
GTCGTACTTC TGCTGCTGCA GGGAAGTCGG GAACTGAAAC GCCTTATCCA CCCCAGAGCC
ATGTTTTCTA TCCGCATCGG CAAAACCGCG CTGCCGGATC GGGTCGTGGA CGCTGTGTGG
GGTTTTTTCT CGGCGTACGC CCTGGTATTC GTTATCTGTA TGCTGATATT GATGGCCATG
GGGCTGGATG ACATTACCGC CTTCAGTGCC ACGGCTGCCT GTCTGAATAA CCTTGGCCCG
GGTCTGGGTG AAGTGGCCAG CAACTATGCC AGTATAGGTG ATGGCGCCAA GTGGGTACTG
GTCGTGGCCA TGTTGTTTGG GCGGCTCGAA ATCTTTACCC TGTTGGTGCT TTTTACCCCC
ACTTTCTGGA GAACCTGA
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| Protein sequence | MQYRTIIRIT GLLMGLFSIT MLPPALVAIY YKDGGGTAFI QAFVVSLILG FIFWYPNRKH
KSELRTREGF LIVVLFWTVL GSIGALPFIF SSTPDLSWTD SFFESFSALT TTGATVIVGL
DSLPKAILFY RHLLQWLGGM GIIVLAVAIL PVLGIGGMQL YRAEIPGPVK DSKMTPRIAE
TAKALWYIYL LLTIACATAY WAAGMSVFDA ICHSFSTIAI GGFSTHDASM GYFDSPTINM
ICVVFLIIAA VNFSVHFAAM SRRGINLRVY FRDTEFKILV AIQLLLTAIC FATLYHSGIY
DSPEETFDYA LFQAVSISTT AGFGTESFHL WPLFLPMLLI FSSFIGGCGG STAGGIKVIR
VVLLLLQGSR ELKRLIHPRA MFSIRIGKTA LPDRVVDAVW GFFSAYALVF VICMLILMAM
GLDDITAFSA TAACLNNLGP GLGEVASNYA SIGDGAKWVL VVAMLFGRLE IFTLLVLFTP
TFWRT
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