Gene Sama_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0029 
Symbol 
ID4602286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp30571 
End bp30870 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID639779338 
Productredox protein regulator of disulfide bond formation 
Protein accessionYP_925911 
Protein GI119773171 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0748983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGAG TAAAATTTGC CCCAATGACC ATTGCTCTCT TTTCTAGATC TCTTATGAAC 
AATATTTTTG CCGAAGCCGA TAAACAACTC GACGCTCTGG GACTACGCTG CCCGGAACCC
GTAATGATGG TACGCAAAAC AGTGCGACAC ATGGCTGATG GCGAAACCCT GCTGATTATC
GCTGATGATC CTGCTACCAC CAGAGACATT CCAAGCTTTT GCGAGTTTAT GGACCATACA
CTACTCGCCA GTGATACGTC AGTGACACCC TATCGATACC TGATTAAAAA GGGCCTCTAG
 
Protein sequence
MTGVKFAPMT IALFSRSLMN NIFAEADKQL DALGLRCPEP VMMVRKTVRH MADGETLLII 
ADDPATTRDI PSFCEFMDHT LLASDTSVTP YRYLIKKGL