| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0027 |
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| Symbol | |
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| ID | 4602284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 26565 |
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| End bp | 27134 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779336 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_925909 |
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| Protein GI | 119773169 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0112451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA ACAAAGTGAG ATGCGCTTGG GTCAGTGATG ATAAGCTGTA CCAGCAGTAT
CACGATGAGG TATGGGGCAT GCCGGTTTAC GATGCCAAAG AGCTGTTTGC CAAGCTTTGT
CTCGATGGTC AGCAGGCCGG CTTATCCTGG ATTACCATCC TCAGAAAGCA GGCAAGTTAC
GAGGCCGCCT TCGCCGATTT TGAACCTGCT ATCATAGCCA CTTATGACGA GGCTAAGGTT
GAAGAGCTGC TGCAAAATCC GGGCATAGTC CGTAACCGGG CCAAGGTGAA TTCCATCATT
CGCAATGCCC GCGCATATCT GAATTACGTT GATGCCGGCA ACGACTTCTC GATGTTCTTG
TGGAGCTTTG TCGGTGGTGA ACCCAAGGTC AATCGATTTT CGTCCATTTC AGAGGTGCCT
GCCCAGACTG CTGAATCCGA AGCCATGTCC AAGGCGCTTA AGAAACTGGG CTTCAATTTC
GTTGGTCCCA CTATTTGCTA TGCCTTTATG CAGGCGGTGG GCATGGTTAA CGATCACACC
ACAGACTGCC ATTGCTACCA AAAATATTGA
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| Protein sequence | MADNKVRCAW VSDDKLYQQY HDEVWGMPVY DAKELFAKLC LDGQQAGLSW ITILRKQASY
EAAFADFEPA IIATYDEAKV EELLQNPGIV RNRAKVNSII RNARAYLNYV DAGNDFSMFL
WSFVGGEPKV NRFSSISEVP AQTAESEAMS KALKKLGFNF VGPTICYAFM QAVGMVNDHT
TDCHCYQKY
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