| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0023 |
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| Symbol | |
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| ID | 4602280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 21420 |
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| End bp | 22082 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779332 |
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| Product | hypothetical protein |
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| Protein accession | YP_925905 |
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| Protein GI | 119773165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00309648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGTCCC TATCTCCCCA AATATCTGTG GTGGGTGAGC ATCAGGTATT CCTCGGCTTA
CCGCTTGTGT CAGACCCTGA GCTCTGTCTG CATACCCAGA GCCGTATCTG GCAACTGGCT
AATCATTGTC GGGATCGAGA CGGCGTGTTG GAAACTGTGC CGGGTATGAA CAACCTGACG
TTAAGACTGA GTGACAATCA AGACCCCGAA CACTGGTGCC GCTGGTTAGA GGCCGAGTTT
CAACGCACCA CTGGTATAGA TTTTCCCATA GGGCGCGAGC ATATCATCCC CGTCAGTTAC
GGCGGAGAAG ATGGCCCCGA CCTACAGTCG GTGGCCAGTC ACCACGGGCT GGGTAGCCGG
GACATCATTC GTCTCCACAC CCAAGGCGAT TACCGGGTCC TCTTTATCGG ATTCTTACCC
GGATTTCCCT ACCTCAGTGG CCTGCCAAAT GCGCTACACA CTCCCAGACT CGCCACACCA
AGACAAGCAG TACCTGCAGG CAGTGTCGGA ATAGGTGGCA CTCAAACAGG CATTTATCCC
TGCAAGGCTC CCGGCGGTTG GCACCTTATA GGTAAAACTC ATACTGAACT ATTTGATCCC
ACCAGCGATT CCCCTTGCCT GCTATCGCCA GGTGACCGGG TTATTTTTGT TGAGGATAGG
TAA
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| Protein sequence | MKSLSPQISV VGEHQVFLGL PLVSDPELCL HTQSRIWQLA NHCRDRDGVL ETVPGMNNLT
LRLSDNQDPE HWCRWLEAEF QRTTGIDFPI GREHIIPVSY GGEDGPDLQS VASHHGLGSR
DIIRLHTQGD YRVLFIGFLP GFPYLSGLPN ALHTPRLATP RQAVPAGSVG IGGTQTGIYP
CKAPGGWHLI GKTHTELFDP TSDSPCLLSP GDRVIFVEDR
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