| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0020 |
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| Symbol | |
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| ID | 4602277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 19038 |
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| End bp | 19778 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779329 |
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| Product | hypothetical protein |
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| Protein accession | YP_925902 |
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| Protein GI | 119773162 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3819] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00300122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGACTG ACCTGCTCGC CCTCAATTAC TGGCCGCTGA TTGGTATTCC CGTGGTGGTG
CTGGGGTTCG CACTGAAATT CAATCCCTTG CTGGTTGTTA CCCTCGCCGG GCTGATTACC
GGCTGGGCCG TAGGCATGGA TGCCGCGACT TTGCTGGAAA CCTTTGGTGA GAAGTTTCTC
TCCAGCCGTC AGCTGGCGTC TTTCCTGCTG ATCCTGCCGG TGATAGCCCT GCTGGAACGC
CACGGTCTCA GGGAGCGTGC CAAAGGCTGG ATTGCCACTA TCAAAAGCGC CACTACGGCG
CGTATTTTGT CGCTCTACTT TGTTGTCAGG GAAGCCAGCG CCGCGTTGGG ACTGTTGAGC
CTTGGTGGCC ACGCCCAAAC GGTGAGACCC CTGTTGGCCC CAATGGCAGA GGCTGCCGCT
ATCAACGCCT ACGGTCCCTT GCCCAAACCC ATTCGCGACA AAATCGCCGC CCACGCCGCT
GCCTGTGACA ATGTGGCCAT GTTTTTTGGT GAAGATATCT TTATCGCCTT CGGCGCCGTG
CTGCTCATGG ATGCCTTCCT CAAAGAAAAC GGCATTCAAG GTATCGAGCC TTTGCACATA
GGCCTGTGGG CCATCCCCAC CGCCGTTGCG GCGCTGATTA TTCATCTGTT CAGGCTCTCA
CGGCTGGAAG CTGGCATTCG CCGCGATATC GCCCAATGGC GGGCAACAGA AGACATAGAT
CAACAGGGAG CCGAAGCATG A
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| Protein sequence | MLTDLLALNY WPLIGIPVVV LGFALKFNPL LVVTLAGLIT GWAVGMDAAT LLETFGEKFL
SSRQLASFLL ILPVIALLER HGLRERAKGW IATIKSATTA RILSLYFVVR EASAALGLLS
LGGHAQTVRP LLAPMAEAAA INAYGPLPKP IRDKIAAHAA ACDNVAMFFG EDIFIAFGAV
LLMDAFLKEN GIQGIEPLHI GLWAIPTAVA ALIIHLFRLS RLEAGIRRDI AQWRATEDID
QQGAEA
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