| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0015 |
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| Symbol | recF |
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| ID | 4602272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 13296 |
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| End bp | 14378 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779324 |
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| Product | recombination protein F |
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| Protein accession | YP_925897 |
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| Protein GI | 119773157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00214178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000779425 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTCA GCCGTCTTTC CATCGACGCA TTTCGCAATA TTGATTCAGC CCAGCTTGCC
CCAGGCGCCG GGCTGAATCT CATTTATGGC CACAACGGCA GCGGAAAAAC CAGTATCCTC
GAAGCCATTT ACTTTCTGGG TATGGGGCGG TCGTTTAGAA GCCATTTGTC TCAGCGGGTT
ATTCAGAACG ATGCCGACTG CCTGACGCTG TTTGCCGTAG CCGAAGGGCA GGCCGGTGAC
AGTCGTATCG GTCTGCGGCG GCATCGCAGC GGCGACACCG AAGTCAAAAT CGACGGCGAA
AAGGTCAAGA GACTGTCGCA ATTGGCTGAA GCCTTACCTA TCCAGGTGAT TACGCCAGAG
AGCTTTTCGC TGCTGTTTGA GGGGCCATCG GCCAGGCGTC AGTTTATCGA TTGGGGGGCC
TTTCATGCCT CCAAACAGTT CCATCTGGCA TGGATGAATA CACGCAGAAT TTTAAAACAA
AGAAATCAGC TGCTTAGAGA TGGTGCCAGT TACGAACACA TCGCTTTCTG GGACAAGGAA
TTAATTCGCT ATGCCCTTGA AGTCACAGCG ATAAGAAACG ATTATGTAGG CTCGTTAAAT
GGCGTGCTTA AGGGTATAAT CGGGGAGTTT TTACCCGATG TGGATATCCG GGTTTCTTTC
ACCCGCGGCT GGGACAGCAA GACCGACTTT TCCGAGTTGC TCCAGAGCCA GTATGCGCGG
GATTTGGCCA TAGGCCATAC GGTCAGCGGA CCCCATAAGG CAGACCTCAG ATTGCGGGTT
GGTAATTTGC CCGCACAGGA TGCGCTGTCC CGTGGACAAT TGAAGTTATT GGTGTGTGCC
CTGCGCATTG CCCAGGGCAA GTTGCTTAAG CAACAAATCG ATAAACACAG CATCTATTTG
GTGGACGATC TGCCCTCCGA GTTGGATGCC AAGCACAGGC AGCTGTTGCT GAAGGAACTG
ATAGATACGG GGGCGCAATT GTTTGTCACC GCCATCGAAC CTTCAGCCAT TGTGGATTCT
TTGCCAGTGC CCCCCGACAG GATGTTTCAT GTACAGGCCG GCCGGGTAAC ACAGACTAAA
TAA
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| Protein sequence | MSLSRLSIDA FRNIDSAQLA PGAGLNLIYG HNGSGKTSIL EAIYFLGMGR SFRSHLSQRV
IQNDADCLTL FAVAEGQAGD SRIGLRRHRS GDTEVKIDGE KVKRLSQLAE ALPIQVITPE
SFSLLFEGPS ARRQFIDWGA FHASKQFHLA WMNTRRILKQ RNQLLRDGAS YEHIAFWDKE
LIRYALEVTA IRNDYVGSLN GVLKGIIGEF LPDVDIRVSF TRGWDSKTDF SELLQSQYAR
DLAIGHTVSG PHKADLRLRV GNLPAQDALS RGQLKLLVCA LRIAQGKLLK QQIDKHSIYL
VDDLPSELDA KHRQLLLKEL IDTGAQLFVT AIEPSAIVDS LPVPPDRMFH VQAGRVTQTK
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