| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0014 |
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| Symbol | |
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| ID | 4602271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 12168 |
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| End bp | 13268 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779323 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_925896 |
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| Protein GI | 119773156 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000733559 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000643873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTT CTATTGATAG GGATGCGCTG TTAAAGCCGT TGCAGCTGGT AAGCGGAGCA
GTGGAAAGAC GGCATAATCT GCCTATTCTG GCGAATCTTT TAGTGGAAGT AAGTGGTCAC
TCACTTAAGA TGACCGGCAC CGACCTGGAA GTAGAACTCG TGGGTGAAGC CACGGTTCAC
GGTGATGTTC AGGAAGGCCG CACCACAGTG CCTGCCAAGA AGTTACTGGA TATCGTCAAG
TCCCTGCCAG AGCAGACCGA AATCAAGGTC GAGCAGCAGG AAAACAAATG GTTGCTGCGC
TGTGGTCGTA GCCGTTTCTC CCTGGCGACC CTGCCAGCCG AAGAATACCC CAATGTTGAG
GCGTTCCGCC CGGACATCGA ATTTACCCTC AAGCAGGGCA CCCTAAAGTC GCTTATCGAC
TCCACCCAGT TTTCCATGGC CAACCAGGAT GTGCGTTACT ACCTTAACGG TCTGTTGATA
GAGACCGAAG GCAATGTACT GCGTGCCGTG GCCACTGATG GCCATCGTCT GGCACTCAGC
CATCGCATGA TTGAAGCCTC ATTGCCTGAG AAGCAGGTGA TTGTGCCCCG CAAGGGGGTG
GTGGAACTGT CGCGCCTGCT CGACGCGGAA GATCAGGACA TCACCCTGGC CATCGGTGAG
AGCGCGATTC GCGCCACGAC CGCCACCGCC GTGTTCACCA GTAAGCTGGT GGACGGCCGC
TTCCCTGATT ATCGCCGGGT GCTGCCAAAG GGCGGTGACA AGATAGTCAT AGCCAGTCGT
AATCAGCTTA AACAGGCATT GCTGCGGGCG TCGATTCTGT CGAACGAGAA ATTCCGTGGT
GTGCGTATCC TGCTGGAAGA TGGCCTGCTT AAAATCACCG CCAACAATCC CGAGCAGGAA
GAGGCCGAAG AAATCATCGA CGTGGACTAC AACTCCACCA CTCTTGAAAT CGGCTTTAAC
GTCTCCTATT TGCTGGATGT GCTCAATAGC CTGCGTTCCG ATGAAGTGCG TGTCACCCTT
ATCGACAGCA ACTCCAGCGC CCTGATTGAA AACCACGTGG AAGAAGACTC CATGTACGTG
GTTATGCCTA TGAGGCTCTA A
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| Protein sequence | MKFSIDRDAL LKPLQLVSGA VERRHNLPIL ANLLVEVSGH SLKMTGTDLE VELVGEATVH
GDVQEGRTTV PAKKLLDIVK SLPEQTEIKV EQQENKWLLR CGRSRFSLAT LPAEEYPNVE
AFRPDIEFTL KQGTLKSLID STQFSMANQD VRYYLNGLLI ETEGNVLRAV ATDGHRLALS
HRMIEASLPE KQVIVPRKGV VELSRLLDAE DQDITLAIGE SAIRATTATA VFTSKLVDGR
FPDYRRVLPK GGDKIVIASR NQLKQALLRA SILSNEKFRG VRILLEDGLL KITANNPEQE
EAEEIIDVDY NSTTLEIGFN VSYLLDVLNS LRSDEVRVTL IDSNSSALIE NHVEEDSMYV
VMPMRL
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