| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0013 |
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| Symbol | dnaA |
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| ID | 4602270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 10775 |
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| End bp | 12148 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639779322 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_925895 |
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| Protein GI | 119773155 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000224276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000759559 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGGTTT CACTTTGGCA ACAGTGTATC GGCAGGCTGC AGGATGAGCT TTCTGCACAG
CAATTCAGCA TGTGGATCAG ACCGTTACAG GCCGAAATGG AAGGTGACAC CCTGGTGCTT
TATGCGCCAA ACCGCTTCGT GTTGGATTGG GTACGCGACA AGTACATCAA TTCCATCAAC
CAATTTTTTA CCGAGCAGTT GGGGGATAAC GCCCCAAAAC TACGCTTTGA TATCGGCAGT
CGTCCCTCTG CCAAACCTCA AGCTCCGGCG CCTGCCGCTG TTAAAGCTGC CGCGCCTCAG
CCAAAGCCAG GCAACAGCTT CGTCAGCCAG CCTGAGCCGG CCGTGAGCAA TCATCGCAGT
AACATCAACC CCACCTACCA GTTTGATAAC TTCGTAGAAG GTAAATCGAA CCAGTTGGGT
AAGGCCGCGG CATTGCAAGT GGCTGAAAAT CCGGGCGGCG CATATAACCC ACTGTTTTTG
TATGGTGGTA CCGGTCTGGG TAAAACCCAC CTGCTGCACG CTGTTGGCAA TGGCATTATC
AAGAACAATC CCAATGCCAA AGTGGTGTAT ATGCATTCCG AGCGCTTTGT GCAGGACATG
GTCAAGGCGC TGCAAAACAA TGCCATTGAA GAGTTCAAGC GTTATTACCG CAGTGTGGAT
GCGCTCTTTA TCGATGACAT TCAATTTTTT GCCAACAAAG ACCGATCCCA GGAAGAATTT
TTCCACACCT TCAACGCGCT GCTGGAAGGC AATCATCAGA TCATCCTGAC GTCAGATCGC
TATCCCAAAG AAATCGATGG GGTAGAAGAC AGGCTCAAGT CCCGCTTTGG TTGGGGCCTG
ACAGTCGCCA TCGAGCCACC TGAGCTTGAG ACCCGGGTGG CGATTTTGAT GCGCAAGGCC
CAGGAGAGCG GCATCAACCT GCCCGATGAA GTGGCTTTCT TTATTGCCAA GCGCTTGCGT
TCCAACGTAC GTGAGCTCGA AGGCGCTCTG AACCGGGTTA TTGCCAACGC GAATTTCACC
GGTCGGCCCA TCACTATCGA TTTTGTGCGT GAAGCACTGC GTGACCTCTT GGCTCTGCAG
GAAAAATTGG TCACTATAGA CAACATTCAG AAGACGGTGG CCGAATACTA CAAAATCAAA
ATGGCTGACA TGTTGTCCAA GCGTCGTTCC CGCAGTGTGG CACGTCCAAG ACAAATGGCC
ATGGCCCTCT CCAAAGAGCT GACCAACCAA AGTTTGCCCG AGATTGGCGA TGCCTTTGGT
GGCCGCGACC ACACGACTGT GCTGCATGCC TGTCGCAAGA TCGCCCAGCT GCGCGAAGAG
AGCCACGATA TTAAAGAAGA TTACGCCAAC CTGATTCGTA CCTTATCTTC CTAA
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| Protein sequence | MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AEMEGDTLVL YAPNRFVLDW VRDKYINSIN
QFFTEQLGDN APKLRFDIGS RPSAKPQAPA PAAVKAAAPQ PKPGNSFVSQ PEPAVSNHRS
NINPTYQFDN FVEGKSNQLG KAAALQVAEN PGGAYNPLFL YGGTGLGKTH LLHAVGNGII
KNNPNAKVVY MHSERFVQDM VKALQNNAIE EFKRYYRSVD ALFIDDIQFF ANKDRSQEEF
FHTFNALLEG NHQIILTSDR YPKEIDGVED RLKSRFGWGL TVAIEPPELE TRVAILMRKA
QESGINLPDE VAFFIAKRLR SNVRELEGAL NRVIANANFT GRPITIDFVR EALRDLLALQ
EKLVTIDNIQ KTVAEYYKIK MADMLSKRRS RSVARPRQMA MALSKELTNQ SLPEIGDAFG
GRDHTTVLHA CRKIAQLREE SHDIKEDYAN LIRTLSS
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