| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4685 |
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| Symbol | |
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| ID | 4598229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4973077 |
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| End bp | 4973778 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 639779294 |
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| Product | RNA polymerase sigma factor SigM |
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| Protein accession | YP_925867 |
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| Protein GI | 119718902 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.501427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGG ACCACGCCGG GCCCGGCGAC CAGGCCACCG ACCAGGACCT GCTGCGCGCC
CACGTCGACG GCGACCCGGA CGCCTTCGGG CTGCTGTTCG CCCGGCACCG CGACCGGCTC
TGGGCGGTGG CGGTGCGCAC GATGGGGAAC CGGGAGGACG CCGCGGACGG GCTCCAGGAC
GGCCTGGTCG CGGCGTACCG CCGGGCGGGC ACCTTCCGCG GCGACGCCGC CGTGACCACC
TGGCTGCACC GGGTCGTGGT CAACGCGTGC CTGGACCGGC TGCGGGCGGC GAAGGTGCGC
CGGGCGGAGG CGCTGCCCGA CGACCTCGAG GAGTACCGCG ACCGCGGCTC CACGGCGTCG
TCGACGCCCG CGACCGAGGA CCCGGCGGAC CTCGCGGTGC GCGACGAGCG GCGGCGCCTG
GTGCTCGCGG CGCTCGCGAC GCTGCCGGAC GAGCAGCGCG CGGCGCTCGT GCTGGTCGAC
ATGGAGGGCT ACCCGGTCGC CGAGGCCGCC CAGGTGCTGG ACTGCGCCGT GGGCACCGTC
AAGTCCCGCT GCTCCCGGGG CCGGGCCCGG CTCGCCGAGG TGTTGGCCCC GCTGCTCGCC
GACCCCGCCG GTGACCCGGG ACACGCCGAG CCGGGGAACC CGCCTGCGCT GCGGTCCGTC
GAATCCCACG ACGCACCTCG GGGGCCACCG GACGCGACCT GA
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| Protein sequence | MSMDHAGPGD QATDQDLLRA HVDGDPDAFG LLFARHRDRL WAVAVRTMGN REDAADGLQD
GLVAAYRRAG TFRGDAAVTT WLHRVVVNAC LDRLRAAKVR RAEALPDDLE EYRDRGSTAS
STPATEDPAD LAVRDERRRL VLAALATLPD EQRAALVLVD MEGYPVAEAA QVLDCAVGTV
KSRCSRGRAR LAEVLAPLLA DPAGDPGHAE PGNPPALRSV ESHDAPRGPP DAT
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