| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4680 |
|---|
| Symbol | |
|---|
| ID | 4598224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4964017 |
|---|
| End bp | 4965606 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639779289 |
|---|
| Product | protein of unknown function DUF853, NPT hydrolase putative |
|---|
| Protein accession | YP_925862 |
|---|
| Protein GI | 119718897 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0218814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGG ACATGACGTC GCCGATCGCC GAGCAGGTCG CCGCGGGCTA CCGCTTCGAG
GGTCCGGCCC TCGAGCTCGG CGCCCTGATG CTCGCCGCCG ACCAGCTGGT CGACGTACCG
GTCCGGATTC CGTTGGCGAT GCTGAACCGG CACGGCCTGG TGGCCGGGGC GACCGGCACC
GGCAAGACCA GGACTCTTCA GCTGCTCGTC GAGCAGCTCA GCGCCCAGGG CGTCCCGGTC
TTCGCCGCGG ACATCAAGGG CGACCTGTCC GGGCTGGCCC AGCCGGGCAC CGCGAGCGAG
AAGCTCAGCG CCCGGGCCGC CACCGTCGGC CAGGAGTGGG CGGCCGCCGG CTTCCCCGTG
GAGTTCTACG CGATCGGCGG CGTCGGGCCC GGGCTGCCGC TGCGGGTCAC CATGAGCGCG
TTCGGGCCGA CCCTGCTGAG CAAGGTGCTG GGCCTCAACG ACACCCAGGA GTCCAGCCTG
GGGCTGGTCT TCCACTACGC CGACCGGGCC GGCCTGCCGC TGCTCGACCT CGCCGACCTC
CGCGCGGTGC TCGCGCACCT GCTCAGCGAC GAGGGCAAGG CCGAGCTCAA GGCGCTGGGT
GGGCTGTCGT CGGCGACCGC CGGGGTGATC CTGCGCGAGC TGATCGGCCT GGAGGACCAG
GGCGGCGACG TGTTCTTCGG CGAGCCGGAG TTCGAGTCGG CGGACCTGCT CCAGCTCGCC
CCCGACGGCC GCGGCCTCGT CTCGCTGGTC GAGCTGCCGC AGCTGCAGGA CCGGCCGGCG
ATCTTCTCGA CGTTCCTGAT GTGGCTGCTC GCCGACCTGT TCCACGACCT TCCCGAGGTC
GGGGACGTGG ACAAGCCGAG GCTGGTGTTC TTCTTCGACG AGGCGCACCT GCTCTTCGCC
GACGCGTCCA AGGCGTTCCT CGACCAGGTC GCCCAGACCG TGCGGCTGAT CCGGTCGAAG
GGGGTCGGGG TGTTCTTCGT GACCCAGAGC CCCACCGACG TGCCCGACGC GGTGCTCGCC
CAGCTCGGTT CGCGGATCCA GCACCAGCTG CGCGCGCACA CCCCCAACGA CGCCAAGGCG
CTCAAGGCGA CCGTGGCGAC CTACCCGACC AGTGGGTACG ACGACCTCGG GCAGGTCATC
ACCGGCCTCG GGATCGGCGA GGCCGTGGTG ACCGTGATGA ACGAGCGCGG TGCGCCGACG
CCGGTGGCCT GGACCCGCCT GCGGGCGCCC CAGTCGCGGA TGGATCCGTG CGATCCCGAC
GTCCTCACCG CCACCGTCGC GGCCAGCCCG CGGGCCGCGA AGTACCAGGC CGCGATCGAC
CGGGAGTCCG CGCGCGAGAT CCTCGCCGAC CGGCTCGAGC AGGGTGCCGC GAAGCAGGAC
CGCGAGCAGG CGGGCGCCCC CGGCCCGGAC CCTGATCCGG CGCCGCGCCC GGTGCCGGTC
CCGAAGCCCA GCACCGACAA GCCCAGCAGC AGGCCCCCGA AGGACGACAG CGTGGTCGAG
CAGGTCGTGA AGTCCGACGC GTTCAAGGAC TTCATGCGTA CCGCCGCCCG CGAGATCGCG
CGGGGGATGT TCAAGACCGG CCGGCGCTGA
|
|---|
| Protein sequence | MTADMTSPIA EQVAAGYRFE GPALELGALM LAADQLVDVP VRIPLAMLNR HGLVAGATGT
GKTRTLQLLV EQLSAQGVPV FAADIKGDLS GLAQPGTASE KLSARAATVG QEWAAAGFPV
EFYAIGGVGP GLPLRVTMSA FGPTLLSKVL GLNDTQESSL GLVFHYADRA GLPLLDLADL
RAVLAHLLSD EGKAELKALG GLSSATAGVI LRELIGLEDQ GGDVFFGEPE FESADLLQLA
PDGRGLVSLV ELPQLQDRPA IFSTFLMWLL ADLFHDLPEV GDVDKPRLVF FFDEAHLLFA
DASKAFLDQV AQTVRLIRSK GVGVFFVTQS PTDVPDAVLA QLGSRIQHQL RAHTPNDAKA
LKATVATYPT SGYDDLGQVI TGLGIGEAVV TVMNERGAPT PVAWTRLRAP QSRMDPCDPD
VLTATVAASP RAAKYQAAID RESAREILAD RLEQGAAKQD REQAGAPGPD PDPAPRPVPV
PKPSTDKPSS RPPKDDSVVE QVVKSDAFKD FMRTAAREIA RGMFKTGRR
|
|---|
| |