| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4652 |
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| Symbol | |
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| ID | 4596513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4929169 |
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| End bp | 4930671 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639779261 |
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| Product | transposase, IS111A/IS1328/IS1533 |
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| Protein accession | YP_925834 |
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| Protein GI | 119718869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.801601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTCA CCCCGATCCA GCCGGCCACG CGAGTTTGCG CGGGCCTCGA CTGGGCCAAG
GACGACCACG TCGCGTGCAT CGTCGACGCC GACGGCGAGG TCCTGGACCG GTTCAGTGTG
GCCCACACCG CGGCCGGACT GCGGCGCCTG GTCATCCGGC TGCTCAAGGC CGGCGTGGAC
GAGGTCGGCA TCGAACGCCC CGACGGGCCG GTCGTCGACG CCCTGCTGGC CGCCGAGCTC
ACCGTGCTGG TCATCGCGCC GGCCCAGGTC AAGAACCTGC GCTCGCGCTA CGGCTCGGCG
GGCAACAAGG ACGACCGGTT CGACGCCTAC GTGCTGGCCG ACGTGGTCCG CACCGACCGA
CGTCGCCTCA CCCCACTGAC CCGCTCGACC CCAGCCGCGC AGGCGATGCG TTCCTCCGTG
CGTGCCCGTC GGGATCTGGT CGAGCACCGT GTCGCAGCTG CGAACCCGCT CCGCGCCCAC
CTGCAGGTCG TGTTCCCCGG CATCGTGGAC CTGTTCGCCG CCCTGGACTC GGCGGTCAGC
CTGAGTTTCC TCGAGCGATT CCCCACCCAG GCCAAGGCCG ACTGGCTCAC CGTCGACCGG
CTCGCAGCCT GGCTCGCCAA GGTCGCCTAC TCCGGCCGCA CCGACCCCGC CGTGCTGCAC
GCCCGGCTCC TGGCCGCGCC CCGCGGCACC ACCGGCCCCG AAGCCGGGTT CCACGCCGCC
ACCACGCTGG CGTTCGTCGC ACTCCTTCGG ACCCTGAACA CCCAGATCGC CGCGCAGGCC
GACTCGATTG CCGAGCAGCT CGACATCCAC CCCGACGCGC ACATCGTGAA GTCGCTGCCC
CGATCCGGGA CCGTGCGCGC TGCTCGCCTG CTCGCCGAGA TCGGCGACGC CCGCGGCAGG
TTCCCCACCG CGGACTCGCT GGCCTGCCTG GCCGGCGTCG CGCCCTCGAC CCGCCAGTCC
GGCAAGGTCA AAGCGGTCAC CTTCCGCTGG GGAGCCGATA AGGAACTCCG CGACGCCCTG
TGCGACTTCG CCGCCGACTC CCGACACGAC AACGCCTGGG CCGCCGACCT CTACAACCGC
GCCCGGGCCC GCCACCAGAC CACCCCCACG CCGTGCGGAT CCTGGCCCGC GCCTGGGTCG
ACGTCATCTG GCGCTGCTGG CAAGACCACG TCGCCTACGA CCCCGACCAA CACCGAGCGC
TCCAACGCAC CCTCAACCAA CACACCACGA ACGCCGCCTG ACACAGCGGA CGTTGACACA
GGGCAACTCA TGCGGGCGCA CCGCAAGCGG GCCGCCGACG AGGGCTTCCA GGTGACCTAC
CGCCAGCATC GGCCGATGGT CGAACGCTCC ATCGCCTGGC TCACCCGCGG TGCCAGACGC
GTCCCCTACC GAGGTGTGGA GAAGAACAAC AACTGGCTCC ACCACCGCGT CGCCGGCCTC
AACCTGCGTC GACTCCTCGC ACTGGGCCTC ACCATCGAGG ACGGGGCCTG GGTCCTGGCC
TGA
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| Protein sequence | MSVTPIQPAT RVCAGLDWAK DDHVACIVDA DGEVLDRFSV AHTAAGLRRL VIRLLKAGVD
EVGIERPDGP VVDALLAAEL TVLVIAPAQV KNLRSRYGSA GNKDDRFDAY VLADVVRTDR
RRLTPLTRST PAAQAMRSSV RARRDLVEHR VAAANPLRAH LQVVFPGIVD LFAALDSAVS
LSFLERFPTQ AKADWLTVDR LAAWLAKVAY SGRTDPAVLH ARLLAAPRGT TGPEAGFHAA
TTLAFVALLR TLNTQIAAQA DSIAEQLDIH PDAHIVKSLP RSGTVRAARL LAEIGDARGR
FPTADSLACL AGVAPSTRQS GKVKAVTFRW GADKELRDAL CDFAADSRHD NAWAADLYNR
ARARHQTTPT PCGSWPAPGS TSSGAAGKTT SPTTPTNTER SNAPSTNTPR TPPDTADVDT
GQLMRAHRKR AADEGFQVTY RQHRPMVERS IAWLTRGARR VPYRGVEKNN NWLHHRVAGL
NLRRLLALGL TIEDGAWVLA
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