| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4625 |
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| Symbol | |
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| ID | 4596081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4902619 |
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| End bp | 4904226 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639779234 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_925807 |
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| Protein GI | 119718842 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCCAAC CGCCCGGCTG CGGCGAGGGA CGATCCGTCG GGTATCGACG TCTGTATGCG
ACACTGTGTC GCATGCCGGT CACCATCAGG GAAGCGCTGT CGCTGCCGGC TCTGGCCGAC
GGTGATCCGG TCGTGCTCAG CGGCGACGCG GTCCTGGACC GGCCGCTGCG GTGGGTGCAC
ATCTCCGAGG TGAGCGACAT CGGCACGGTC CTGTCCGGCG CCGAGCTGGT GTTGTCGACC
GGTCTCGGGA TGGCGGCGTC GGCCGCTGCC GCGGACGACT TCGTCCGACA GCTGGTCGAG
GTGGGCGCCG CGGGGCTGGT GATCGAGCTC AGCGCGGCGT ACCCGTCGGT GCCCGAGCCG
GCGCTGCGCC GAGCGCGCGC CGCCGGCTTC CCGGTCGTCG CGCTGAACCG ACCGGTGCGG
TTCGTCGACG TCACCGAGGC GGTGCACCGC ACGATCGTCG CGGAGCACTT CGACGAGGTG
GCCTTCGCCG GGCGGGTGCA CGAGACGTTC ACCGAGCTGG GCCTGGCCCG AGCGCCGATG
TCCCGGCTGG TCGAGGCGGC GGCCGATCTC GCGGACGGGT CGGTGGTGCT CGAGGACCTC
GCGCGCCGGG TGCTCGTCGC GGCCGCCCGC GACGAGCCGG TCGACCGGCT GCTGACCGAC
TGGGAACGCC GGTCACGGCT TACGCCGTTC CTTCGCGCGA GCGGCCGGGG TGGCCCGGAA
GGCTGGCTGA CCACGCCGGT CGGCATCCAG GGCGGCGCAT GGGGCCGGAT CGTGGTGACC
GCGCCGCGCG ACGGCGACCG GGCGCGGCTC GTGGCGGAGC GCACCGCACA GGCGCTCGAG
CTCGGCCGGA TGATCGAGCG GGACGAGACC TCCCTCCAGC TCCGGGTCCA CGGCGGCTTC
CTCCTCGACC TGCTCGATGG CCGGCTCGGC GCCGAGCCGG TGGCGGCGGC GCGGCTGCGC
GCGCTCGGGG TGCCCGGGGC GGATGCGTAC GTGGGTGCCG TCGCCCGGCT GCGGTCCGCT
GCTCCGGTGG ACCGCCTGGT CGGCGTGCTC GGCGACGTCC CGGGGCTGGT CGGCGTGCTC
GACGCGGTGC ACGTCGGGCT GCTCGTCCCG GCCGACACGG AGCTCGACCG GCTCGCCCGT
GCCCTGGCCG ACGCCGAGCC CGGCGCAGTG CTAGCGGTCG GTCACCCCGT CCCGAGCGTG
CTCCTCGTGG CCACGTCGAT GCGGTCGGCG CGGGCGGTCT CGGACGTCGC GGTGACGATG
CCCCCGCGGG CCGGCGGCTG CTTCCGGCAG TCGGACATCC GGCTGCCCGG CCTGCTGATG
TCGTTGCGCG GCGACGCCCG GCTGCAGGAG TTCACCGAGG TGGAGCTCGG CACCCTGCTC
GAGCACGAGG CCCGCCACGG CGGTGGCCTG GTCGAGCTGC TGCGCCAGTT CCTCGCCGTC
GGCGGCAACA AGACCGAGCT CGCCCGGGTC GCCCACCGCA ACCGGACCTC GCTCTACCCC
GCGCTCCGCC GGCTCGAGGA CCTGGTCGGC CACCCGCTCG ACGACCCCGC CTCCCGGCTC
TCGCTCGGGG TCGCGCTGCT CGCCCACGAC CAGCACCGCC TCCTGTAG
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| Protein sequence | MPQPPGCGEG RSVGYRRLYA TLCRMPVTIR EALSLPALAD GDPVVLSGDA VLDRPLRWVH
ISEVSDIGTV LSGAELVLST GLGMAASAAA ADDFVRQLVE VGAAGLVIEL SAAYPSVPEP
ALRRARAAGF PVVALNRPVR FVDVTEAVHR TIVAEHFDEV AFAGRVHETF TELGLARAPM
SRLVEAAADL ADGSVVLEDL ARRVLVAAAR DEPVDRLLTD WERRSRLTPF LRASGRGGPE
GWLTTPVGIQ GGAWGRIVVT APRDGDRARL VAERTAQALE LGRMIERDET SLQLRVHGGF
LLDLLDGRLG AEPVAAARLR ALGVPGADAY VGAVARLRSA APVDRLVGVL GDVPGLVGVL
DAVHVGLLVP ADTELDRLAR ALADAEPGAV LAVGHPVPSV LLVATSMRSA RAVSDVAVTM
PPRAGGCFRQ SDIRLPGLLM SLRGDARLQE FTEVELGTLL EHEARHGGGL VELLRQFLAV
GGNKTELARV AHRNRTSLYP ALRRLEDLVG HPLDDPASRL SLGVALLAHD QHRLL
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