Gene Noca_4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4624 
Symbol 
ID4596080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4901971 
End bp4902612 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content73% 
IMG OID639779233 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_925806 
Protein GI119718841 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.629112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGACGT CGAACCAGTG GATCGCCTTC GTGGTGGCCA GCGCCCTGTT CATCCAGGTC 
CCGGGCCCCA GCCTGCTGTT CACGATCGGC CGGGCGCTGA CGGTCGGGCG CCGCGACGCC 
CTGCTGTCGG TGGTCGGCAA CGCGATCGGC GTGACCACCC AGGTGATGTT CGTCGCCGCC 
GGTCTGGGCG CCGTGGTCGC GGCGAGCACC GAGGCCTACG TCGTGCTGAA GATCTGCGGC 
GCGGCGTACG TCGTCTGGCT CGGCATCCAG GCGATCCGGC ACCGCGCGGA CGCCCGGGCG 
GCGCTGGTCG CCGTCGACCA CCTGACGGTC GCGCGCGCGT CCGCCCTGCG CTCGCTGCGG 
ATCGGCTTCA CCGTCGGGCT GACCAACCCC AAGACGATCG TGTTCTTCGT GGCCTTCCTG 
CCGCAGTTCG TCAACGAGCC GGCCGGGCAC GCGGGGCTCC AGCTCGCCCT CCTCGGCCTG 
GTCTTCGGCG TGATGGCGGC AGGGTCCGAC TCGGTCTGGG CGCTGGCCGC CAGCAAGGCG 
CGCGACTGGT TCGCGCGGCG CCCGACGCGG CTGGACAAGC TCGGTGTCGC CGGCGGCGTG 
ATGATGATCG GCCTCGGCGC GACCCTGGCC GCCACCGAGT AG
 
Protein sequence
MPTSNQWIAF VVASALFIQV PGPSLLFTIG RALTVGRRDA LLSVVGNAIG VTTQVMFVAA 
GLGAVVAAST EAYVVLKICG AAYVVWLGIQ AIRHRADARA ALVAVDHLTV ARASALRSLR 
IGFTVGLTNP KTIVFFVAFL PQFVNEPAGH AGLQLALLGL VFGVMAAGSD SVWALAASKA 
RDWFARRPTR LDKLGVAGGV MMIGLGATLA ATE