Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4622 |
Symbol | |
ID | 4596078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4899480 |
End bp | 4900589 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639779231 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_925804 |
Protein GI | 119718839 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0428968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTCA CCGAGCGCGA GCAGGAGATC GTGACCCTGC TGCGGCGCGA TCCGCTCGTC AGCTCGGCGG CGATCGCCGA AGCGCTCGGG ACCACCCGCG CCGCCGTCAA CGTGCATGTC TCGAACCTCA CCCGCAAGGG CATCGTCCTC GGCCGGGGCT ACGTGCTGAA CGAGGGCCCC TCGGTGGTGG TCGTCGGCGG CGCCAACATG GACGTCAAGG CCCGCAGCAC CCGCGCCGCC GTGGTCGCCA CCAGCAACCC CGGCACGGCC GCGATGGCCG CCGGCGGGGT CGGTCGCAAC ATCGCCGAGA ACCTGGCCCG ACTCGGCACC CGGACCCACC TGGTCGCCGC GATCGGCAGC GACGCGCTCG GGGACCAGGT GCTCGCCGCG ACCTCGAACG CAGGGGTGGT GGTGGAGCAC GTACGCCGCA GCGCCCGGTC GACCGGCACC TACACCGCGG TCCTCGACGC CGACGGCGAG CTGGTCGTCG CGGTCGCCGA CATGGCCGCC ACCGACGAGC TCCTGCCTGA CCAGGTCGCG GCGGCGCGCG ACCTGGTGTC CGCCGCGTCG CTGGTCGTCC TCGACGGGAA CCTCTCGACC GGCACGCTGC GCTACGCCCT CGACCTGGCC GCGGAGGTCG GCACCCGGGT GCTGCTGGAC CCGGTCAGCG TCCCGAAGGC TGCCGCGCTC GCGCCGCTCG TCACCGTCGA CCGGCCGGTG TTCACGGTGA CCCCCAACCG CGACGAGCTC GCGGCCCTGA CCGATCTCCC GACCCGGACC CGGCGCCAGC AGGAGGCGGC GGCGCGGGCC CTGCACGACC GCGGCGTCCA GCTGGTCTGG GTGCGGCTCG GCCCGGCCGG CTCGCTGCTC AGCTCACCGA CCGGCGTCGT CGCCCTGGAG GCCGTCCCGG CGGGGGTGGC CGGGGAGGTC ACCGACGTGA CCGGCGCGGG CGATGCGATG ACAGCGGCCT TCTGCCACGC CCTGCTGACC GGCTCCGACC CGGCCGAGGC CGCGGCGTAC GGCCACGCCG CCGCCGCCCT CACCGTCGCC AGCACCGACA CCGTCCGAAC CGACCTCACC GACCGACTCG TCAGGAGCCT GCTGTCATGA
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Protein sequence | MNLTEREQEI VTLLRRDPLV SSAAIAEALG TTRAAVNVHV SNLTRKGIVL GRGYVLNEGP SVVVVGGANM DVKARSTRAA VVATSNPGTA AMAAGGVGRN IAENLARLGT RTHLVAAIGS DALGDQVLAA TSNAGVVVEH VRRSARSTGT YTAVLDADGE LVVAVADMAA TDELLPDQVA AARDLVSAAS LVVLDGNLST GTLRYALDLA AEVGTRVLLD PVSVPKAAAL APLVTVDRPV FTVTPNRDEL AALTDLPTRT RRQQEAAARA LHDRGVQLVW VRLGPAGSLL SSPTGVVALE AVPAGVAGEV TDVTGAGDAM TAAFCHALLT GSDPAEAAAY GHAAAALTVA STDTVRTDLT DRLVRSLLS
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