| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4614 |
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| Symbol | |
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| ID | 4596070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4889383 |
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| End bp | 4890624 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639779223 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_925796 |
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| Protein GI | 119718831 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGATG CGCACGCGGC GGTCGAGCGG ATCTATCGCG AGGAGTACGG CCGGGTCGTC
GCCTCCCTGG TCCGCCGCTT CGGCGACATC GACGTCGCCG AGGAGGCCGC CGGCGAGGCG
CTCCTGGTCG CCCTGGAACG GTGGCCACGA GACGGCGTAC CGCCCAACCC CGGCGGGTGG
CTGACCACGA CGGCCGGCAA CCGCGCCATC GACCGGATCC GCCGCGAGTC GCACCGCGAC
GCCAAGCACC AGGCGGCACT GATGATGCAT GACGACACAC CTCACGAGCC CACGGGACCG
GTTGCCGACG ACCGGCTGCG GCTGATCTTC ACCTGCTGCC ACCCCGCGCT CGCGCCCGAG
GCCCGGGTGG CCCTGACGCT ACGGCTGCTC GGCGGACTGA CGGTCCCCGA GATCGCGCGG
GCCTTCCTCG TGCCCGAGAC CACGATGGCG CAGCGGATCA CCCGCGCGAA GCGGAAGATC
AAGGCCGCCC ACATCCCCTT CCGCGTGCCC GCCGCCGAAG ACCTGGCCGG CCGGCTCTCC
GCGGTGCTCG CGGTGGTCTA CCTGGTGTTC AACGAGGGCT ATCTCGCGAG CTCGGGGGAC
GCGCCGATCC GCGAGGACCT GACCGCCGAG GCGATCCGGC TGGGCCGGAT CCTGCGCGGC
CTGCTCCCGG ACCAGCCCGA GGTCGCCGGG CTGCTCGCCC TCATGCTGCT CACCGACGCC
CGGCGCACCA CGCGGGTGGC GGGCGGGGAG CTGGTGCCGC TGCACGAGCA GGACCGCGGC
GGCTGGGACC GGGAGCTGAT CGCGGAGGGA CACGGGCTGG TCCGCGCGTG CCTCGCGCAC
GCCCGGGAGA CCGGCAGGGC GCCGGGGCAG TACCAGCTGC TCGCGGCGAT CAACGCCGTG
CACACCGACG CCCCGACCGC GGCCGACACC GACTGGTCGC AGATCGCCGC GCTCTACGAG
CAGCTCCACG CGCTCGTGCC GAGCCCCGTC GTCGCGCTCA ACCGGGCGGT CGCCGTGGCC
GAGCTCGACG GTCCCGAGGT CGCGCTCGCC GAGGTGGACC GGCTGCCGCT GACGACGTAC
CACGCCTGGC ACGCGACCCG CGCCGACCTG CTGCGCCGGC TCGGGCGCAG CGCGGAGGCA
CGGGCGGCGT ACGACGCCGC GATCGCGGCC ACCGACAACC CGGCCGAGCG CGCGTACCTG
TCCCGTCGTC GCGGCAGCCT GGCCCCCGGC CCTCGTCCCT AG
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| Protein sequence | MSDAHAAVER IYREEYGRVV ASLVRRFGDI DVAEEAAGEA LLVALERWPR DGVPPNPGGW
LTTTAGNRAI DRIRRESHRD AKHQAALMMH DDTPHEPTGP VADDRLRLIF TCCHPALAPE
ARVALTLRLL GGLTVPEIAR AFLVPETTMA QRITRAKRKI KAAHIPFRVP AAEDLAGRLS
AVLAVVYLVF NEGYLASSGD APIREDLTAE AIRLGRILRG LLPDQPEVAG LLALMLLTDA
RRTTRVAGGE LVPLHEQDRG GWDRELIAEG HGLVRACLAH ARETGRAPGQ YQLLAAINAV
HTDAPTAADT DWSQIAALYE QLHALVPSPV VALNRAVAVA ELDGPEVALA EVDRLPLTTY
HAWHATRADL LRRLGRSAEA RAAYDAAIAA TDNPAERAYL SRRRGSLAPG PRP
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