Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4601 |
Symbol | |
ID | 4598699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4875022 |
End bp | 4876791 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639779210 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_925783 |
Protein GI | 119718818 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCAGCG ACGAGCAGGA CGACACGACC ACCCCCGAGG TGACGTTCGC CGACCTCGGG CTCAGCGACC AGGTGCTGAA GGCGCTGGCC GACGTCGGGT ACGAGAAGCC CTCCGCGATC CAGGCCGCCA CGATCCCACC GCTCCTGGCC GGCCGTGACG TCGTCGGCCT CGCGCAGACC GGCACCGGCA AGACCGCGGC GTTCGCGCTG CCGATCCTCT CTCGGCTGGA CCTCACGCAG ACGACGCCGC AGGCGCTGGT GCTGGCGCCG ACCCGCGAGC TCGCGCTCCA GGTCTGCGAG GCGTTCGAGC GGTACGCCGC GCACGTCAAG GGCGTGCACG TGCTGCCGGT GTACGGCGGG CAGGGCTACG GCGTCCAGCT CAGCGCGCTG CGTCGCGGCG TGCACGTCGT CGTCGGCACC CCCGGCCGGA TCATGGACCA CCTGGAGAAG GGCACGCTCG ACCTGTCCGA GCTGCGCTTC CTGGTCCTCG ACGAGGCCGA CGAGATGCTG AACATGGGCT TCGCCGAGGA CGTCGAGACG ATCCTGGCCG ACACCCCCGA CGACAAGAAC GTCGCGCTGT TCTCGGCCAC GATGCCCGCG CAGATCCGCC GGATCTCGAA GAAGTACCTC GACGACCCCG CCGAGATCAC CGTCAAGGGC AAGACGGCCA CCGCCTCGAA CATCACCCAG CGCTACCTGA CGGTGTCCTA CCCGCAGAAG GTCGACGCCC TCACCCGGAT CCTCGAGGTC GAGAACTTCG AGGGCATGAT CGTCTTCGTC CGCACCAAGA ACGAGACCGA GACGCTGGCC GAGAAGCTCC GAGCCCGCGG CCTGTCCGCG ATGGCGATCA ACGGCGACGT CGCCCAGGCG CAGCGCGAAC GCACGGTCAA CCAGCTGAAG TCGGGCAAGC TCGACATCCT GGTCGCCACC GACGTCGCCG CCCGCGGCCT GGACGTCGAA CGGATCAGCC ACGTCGTGAA CTACGACATC CCCACCGACA CCGAGTCCTA CGTGCACCGG ATCGGGCGCA CCGGGCGGGC CGGGCGCAGC GGCGACGCGA TCTCGTTCGT CACCCCCCGC GAGCGCTACC TGCTCAAGCA CATCGAGAAG GCGACCCGGC AGCCGCTGAC CCAGATGCAG CTGCCCACCG TCGAGGACGT CAACAGCACC CGTCTGTCCC GCTTCGACGA CGCGATCACC GAGGCGCTCT CGCAGACCCA GCGGATCGAC GCGTTCCGCG ACATCGTCGC CCACTACGTC CGCGAGCACG ACGTGCCCGA GGCCGACGTC GCCGCGGCCC TCGCGGTGGT GGCCCAGGGG GAGACCCCGC TGCTGCTCGA TCCGGCCGAC CGCGCGAACG AGCTCCGGGC GCCCCGCGAG GAGCGCGCCG GCCAGGGCAC CCGCCGGGAC CGCCACGACC ACGGCGGCCC CGGCGGCCAC GGCGGCCCGC CTCGCGAGCG CCGGCCCCGC GGGCGCAGCG ACGTCCCGAT GGCGACGTAC CGGATCGCGG TGGGCAAGCG ACACAAGGTC GAGCCTCGCC AGATCGTCGG GGCGATCGCC AACGAGGGCG GCCTGTCGCG CCAGGACTTC GGGCACATCG ACATCCGCGG CGACCACTCG CTGGTCGAGC TGCCCGCCGA CCTCCCGGCC GGCGCGTGGG ACAGCCTGCG CTCGACCCGG ATCTCCGGGA AGCTGATCGA GCTCACCCGC GACGGCGGCG GCCCCGCGGC CGACACCCGA CACAAGAAGC CCCGCCACAA GACCCGTTGA
|
Protein sequence | MSSDEQDDTT TPEVTFADLG LSDQVLKALA DVGYEKPSAI QAATIPPLLA GRDVVGLAQT GTGKTAAFAL PILSRLDLTQ TTPQALVLAP TRELALQVCE AFERYAAHVK GVHVLPVYGG QGYGVQLSAL RRGVHVVVGT PGRIMDHLEK GTLDLSELRF LVLDEADEML NMGFAEDVET ILADTPDDKN VALFSATMPA QIRRISKKYL DDPAEITVKG KTATASNITQ RYLTVSYPQK VDALTRILEV ENFEGMIVFV RTKNETETLA EKLRARGLSA MAINGDVAQA QRERTVNQLK SGKLDILVAT DVAARGLDVE RISHVVNYDI PTDTESYVHR IGRTGRAGRS GDAISFVTPR ERYLLKHIEK ATRQPLTQMQ LPTVEDVNST RLSRFDDAIT EALSQTQRID AFRDIVAHYV REHDVPEADV AAALAVVAQG ETPLLLDPAD RANELRAPRE ERAGQGTRRD RHDHGGPGGH GGPPRERRPR GRSDVPMATY RIAVGKRHKV EPRQIVGAIA NEGGLSRQDF GHIDIRGDHS LVELPADLPA GAWDSLRSTR ISGKLIELTR DGGGPAADTR HKKPRHKTR
|
| |