| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4563 |
|---|
| Symbol | |
|---|
| ID | 4597082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4830422 |
|---|
| End bp | 4831633 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639779174 |
|---|
| Product | acetyl-CoA acetyltransferases |
|---|
| Protein accession | YP_925747 |
|---|
| Protein GI | 119718782 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.274398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGG CATTCGTGTA CGACCACATC CGCACGCCCC GCGGCAAGGG CAAGAAGGTC
GGCTCCCTCC ACGAGGTGAA GCCCGTCGAC CTGATCGTCG GGCTCCTCGA CGAGATCAAG
GAGCGCAACC CCTCCCTCGA CCCCGAGCGC GTCGACGACG TGGTCCTCGG CGTCGTGACC
CCGATCGGCG AGCAGGGCGG GGACATCGCG AAGACCGCCG CGCTCAAGGC CGGCTACCCC
GAGACGGTCG CCGGCGTGCA GCTCAACCGC TTCTGCGCCT CCGGCCTGGA GGCGGTCAAC
CAGGCGGCCT CCCGGGTCCG CGGCGGCTTC GAGGACCTGA TCCTCGCCGG CGGCGTGGAG
TCGATGAGCC GGGTGCCGAT GGGCTCCGAC GGCGGCGCCT GGGCCTCCGA CCCGGCCACC
GCGCTGCAGA CCGGCTTCGT GCCCCAGGGC ATCGGTGCCG ACCTGATCGC CACGCTCGAG
GGCTGGACCC GAGACGACGT GGACGCATAC GCCGCCGAGT CGCACCACCG GGCCGCCAAG
GCCTGGGCCA ACGGCTACTT CAGCGGAGCG GTCATCCCGG TCCGCGACCA GAACGGCCTG
GTCGTGCTCG ACCACGACGA GACGATCCGG CCCGACACGA CCGCCGAGGG CCTGGCCGGC
CTCAAGCCGA GCTTCGCCGA CATCGGTGCG CAGGCGGGCT TCGACGACGT GGCACTGGAG
AAGTACCACT GGGTCGAGCG GATCGACCAC GTCCACCACG CCGGCAACTC CTCGGGCATC
GTCGACGGCG CCTCGCTGGT CGCGATCGGC ACCGAGGAGA TCGGGACCGC GCTCGGCCTC
ACCCCGCGGG CCCGGATCGT CTCGGCCGCG GTGTCCGGCG CCGACCCGAC GATCATGCTC
ACCGGTCCCG CGCCGGCCGC CCGCAAGGCA CTGGCCCGGG CCGGGCTCGA GGTCGGGGAC
ATCGACCTGT TCGAGATCAA CGAGGCCTTC GCCGCCGTCG CGATGCGCTT CATGCGCGAC
CTGGGCATCA GCCACGACAT CACCAACGTC AACGGCGGCG CGATCGCCAT GGGCCACCCG
CTCGGTGCCA CCGGCGCGAT GATCCTCGGC ACCCTCGTCG ACGAGCTCCA GCGCCGCGAC
CTGCGCCGCG GCCTCGCCAC GCTCTGCGTG GGTGGGGGCA TGGGCATCGC GACCATCGTC
GAGATCGTGT GA
|
|---|
| Protein sequence | MAEAFVYDHI RTPRGKGKKV GSLHEVKPVD LIVGLLDEIK ERNPSLDPER VDDVVLGVVT
PIGEQGGDIA KTAALKAGYP ETVAGVQLNR FCASGLEAVN QAASRVRGGF EDLILAGGVE
SMSRVPMGSD GGAWASDPAT ALQTGFVPQG IGADLIATLE GWTRDDVDAY AAESHHRAAK
AWANGYFSGA VIPVRDQNGL VVLDHDETIR PDTTAEGLAG LKPSFADIGA QAGFDDVALE
KYHWVERIDH VHHAGNSSGI VDGASLVAIG TEEIGTALGL TPRARIVSAA VSGADPTIML
TGPAPAARKA LARAGLEVGD IDLFEINEAF AAVAMRFMRD LGISHDITNV NGGAIAMGHP
LGATGAMILG TLVDELQRRD LRRGLATLCV GGGMGIATIV EIV
|
|---|
| |