| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4506 |
|---|
| Symbol | |
|---|
| ID | 4597025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4765096 |
|---|
| End bp | 4766382 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 639779117 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_925690 |
|---|
| Protein GI | 119718725 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTACCG TTCCGCCCAT GCCCTATCGC GATCTCAACG ACCGTGAGCT GCGCGCGCTC
GCCTTCGTCG ACGAGCGCGA GCTGGTCCGC GACCTCGTGG AGCTCGTCTC GGTCCCCAGC
ATCAGCGGCA GCGACGCCGA GTGCGACATC CAGCACCGGC TCGCCAAGCA GCTGGGCGGG
CTCGGCCTCG ACGTCGACCT GTGGCAGCTC GACCTGGACC GGCTCACCGC CGACCCGGCC
TTCCCTGGCT GGGAGGCGCC GCGCACCGAG AGCTGGGGAC TGGTGGCCGC CAGCGGCCCC
GGCGAGCCCG AGCTCGTCCT CCAGGGCCAC GTCGACGTGG TGCCGCCGGG CGACCTCGGC
GCGTGGGGCG CGGACCCGTT CGGCGGGACC GTCACCGGCC GTCGGGTGCA CGGCCGCGGC
ACCTGCGACA TGAAGGCCGG CGTGGTCGCC AACGTCGCCG CCGTCCGCGC GGTGCGCGCC
GCCGGGATCG AGCTGACCAA GCCGTACGCC GTGCAGCTGG TGGTCGGCGA GGAGGACGGC
GGGCTCGGCG CCTTCGCCAC CCTCGAGCGT GGCCACCGGG GCCGGGCCTG CATCATCACC
GAGCCCACCA GCGGCACGAT CACCACCGCG AACGCCGGCG CCCTGACCTT CGAGCTCCGG
GTCCCGGGGG CCGCCACCCA CGCGAGCACG TCGTATGCCG GCGTCAGCGC CCTGGAGAAG
TTCTGGCCGC TGCACGCGGC GCTCGGCGAG CTCGAGGCGC GCCGCAACCG CGACGCCCAC
CCGCTGATGG CGGAGTACCC GCTCGCCTAC CCGCTCTCGA TCGGCAAGGT CGCCTGCGGC
GACTGGGCCA GCACCGTCCC GGACCTGCTG GTCGCCGAGG GCCGGCTGGG CGTGGCGCTG
GGCGAGGACC CCGACGACGC GCGGGCCGAG CTCGAGGAGG CGATCGCCGA GGCCGCGTGC
GCGGACCTGT GGCTGCGCGA CCACGCGCCC ACGATCGCGT GGACCGGAGG CCAGTTCGCC
AGCGGCCAGT ACGCCGAGGG GAGCGGTGCG CTGCTCGACC TGGTCGCCAC CGCGCACGCC
GACGTCACCC GGGGGCCGCG GCCACGCGAG CGCGGGGCGC CGTACGGCAG CGACCTGCGG
CTGTACGCTG CCGCCGGCGT CCCCACGCTC CACTACGGTC CCGGCGACGT CCGGCTCGCC
CACGGCCCGC ACGAGGCGGT GGACGTGGAC GAGCTGGTCG CCGTCACCGA GAGCCTGGTG
CTCGCCCTGG TGCGCGCCTG CGCCTAG
|
|---|
| Protein sequence | MITVPPMPYR DLNDRELRAL AFVDERELVR DLVELVSVPS ISGSDAECDI QHRLAKQLGG
LGLDVDLWQL DLDRLTADPA FPGWEAPRTE SWGLVAASGP GEPELVLQGH VDVVPPGDLG
AWGADPFGGT VTGRRVHGRG TCDMKAGVVA NVAAVRAVRA AGIELTKPYA VQLVVGEEDG
GLGAFATLER GHRGRACIIT EPTSGTITTA NAGALTFELR VPGAATHAST SYAGVSALEK
FWPLHAALGE LEARRNRDAH PLMAEYPLAY PLSIGKVACG DWASTVPDLL VAEGRLGVAL
GEDPDDARAE LEEAIAEAAC ADLWLRDHAP TIAWTGGQFA SGQYAEGSGA LLDLVATAHA
DVTRGPRPRE RGAPYGSDLR LYAAAGVPTL HYGPGDVRLA HGPHEAVDVD ELVAVTESLV
LALVRACA
|
|---|
| |