| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4480 |
|---|
| Symbol | |
|---|
| ID | 4596999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4736350 |
|---|
| End bp | 4737579 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639779091 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_925664 |
|---|
| Protein GI | 119718699 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.193846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGA TCCAGAAGAA GCCCGTCAGC CCCGTCGCCC ACCTGACCCC CGAGGATGTC
GAGCAGATCG GCATCGAGCT CGACGCCATC CGCCAAGACG TCCTCGACAG CCGCGGCGAG
CGCGACGCCC GCTACATCCA CCGTGTCATC GACGTGCAGC GCCGCCTCGA GCTGGGCAGC
CGCGCCGTCC TGCTGTTCTC GTCCTTCCCG CCGGCCTGGA TCGTCGGTAC GGCGGGCCTC
AGCGTCGCCA AGATCCTCGA GAACATGGAG ATCGGCCACA ACATCCTGCA CGGCCAGTGG
GACTGGATGC GGGACCCGAA GATCCACTCC ACGACCTGGG AGTGGGACAT GGCCACCCCG
GCCGCGCAGT GGCAGCACTC CCACAACGAG CTGCACCACA CCTACACGAA CGTGATCGGC
AAGGACAACG ACCTCGGCTA CGGCATCATG CGCGTCGACG AGGACCAGCC CTGGCACCCG
TTCTTCCTGG TCCAGCCGTT GTGGAACTTC ATCAACGCCT GCTTCTTCGA GTACGGCATC
GCCGCGTACG ACCTCGAGCT CGGGGCCACG GTGAAGAGGA AGCAGACCAA GGACCCGGGG
TTCCAGCGCC GCCTGAAGGC GGTGCTCACC AAGGTTCGCC GCCAGGCCAC CAAGGACTAC
CTGGTGCACC CGGCGCTCTC GATCCCGACC GGCTCGTTCC TGGCGACCCT GGCCGCGAAC
TTCACCGCCA ACGTGGTGCG CAACCTGTGG AGCCACTCGG TGATCATGTG CGGCCACTTC
CCCGAGGGCG TCGAGACCTT CGAGAAGCGC TCGATCGACG GCGAGACCCG CGGCGAGTGG
TACCTGCGCC AGATGCTCGG CTCGGCGAAC ATCTCGGGGT CGAAGGCGGT GCACATCATG
TCCGGCAACC TGTCCCACCA GATCGAGCAC CACCTGTTCC CGGACCTGCC CTCGAACCGG
TACGCCGAGA TCGCCCCGCG GGTGCAGGCT CTGTTCGAGA AGTACGACCT CAACTACCAC
GCGGCGCCGC TGCCCAAGCA GGTGTACTCC GCCTGGCACA AGGTGGTCCG GCTCTCGCTG
CCCAACGGCT GGCTGGCGAC GACCAACGTC AAGAACGCGC CGCAGCAGCT GGCGCTGCTC
TACAAGATGG CCACCGGCGG CCCGAAGGTC CGCCGCGCCG CCCAGGCCCG GCTCACCCAG
CAGGCCCGGA AGGCCGGGGC CGCCGGCTGA
|
|---|
| Protein sequence | MTAIQKKPVS PVAHLTPEDV EQIGIELDAI RQDVLDSRGE RDARYIHRVI DVQRRLELGS
RAVLLFSSFP PAWIVGTAGL SVAKILENME IGHNILHGQW DWMRDPKIHS TTWEWDMATP
AAQWQHSHNE LHHTYTNVIG KDNDLGYGIM RVDEDQPWHP FFLVQPLWNF INACFFEYGI
AAYDLELGAT VKRKQTKDPG FQRRLKAVLT KVRRQATKDY LVHPALSIPT GSFLATLAAN
FTANVVRNLW SHSVIMCGHF PEGVETFEKR SIDGETRGEW YLRQMLGSAN ISGSKAVHIM
SGNLSHQIEH HLFPDLPSNR YAEIAPRVQA LFEKYDLNYH AAPLPKQVYS AWHKVVRLSL
PNGWLATTNV KNAPQQLALL YKMATGGPKV RRAAQARLTQ QARKAGAAG
|
|---|
| |