| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4454 |
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| Symbol | |
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| ID | 4596973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4708376 |
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| End bp | 4710556 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639779065 |
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| Product | dehydrogenase, E1 component |
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| Protein accession | YP_925638 |
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| Protein GI | 119718673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGC ACCACCCCCT CGCCCCCGCG TCGCCGTGGG TCGAGGTCGT CGCGACCGAG
GCGGACTGGG ACGCCGCCGA CCCGCAGCTG CTGCGCACGA TCTACGCCCA GCTGGTCTGG
ATCCGGACCT TCGAGCAGTA CGTCCTCGAC CTGGCGGCGA GCGGCCTGAT CCACGGCCCC
GCCCACTCCA GCATCGGCCA GGAGGGCGGC GCGGTCGGGT CGGTCCTCGC GCTCACCAGC
GCCGACTCGG TCAACGGGTC GCACCGCGGC CACCACCAGT TCCTCGCCAA GGCGCTCCAC
CACGTCGAGC CGAAGGGGAT GGACCCGCTC GAGGCGCCCT CGGAGCAGGT CCGCGACGTG
CTGCTGCGCA CCCTCGCCGA GATCTGCGGC CTGGACCGCG GCTGGAGCCA CGGTCGCGGC
GGGTCGATGC ACCTGCAGTG GAAGGAGGCC GGCGCGATGG GCACCAACGC CATCGTCGGC
GGCGGCGTCC CGCAGGCGGC CGGGTTCGCG TGGTCGCACC GCCAGGCGGG CACCGACGCG
GTGTCGGTGA CCTACTTCGG CGACGGGGCG GTCAACATCG GCTCCACCCT GGAGACCATG
AACCTGGCCG GCGCCTGGTC GCTGCCGGTG TGCTTCTTCA TCGAGAACAA CCGGTACGCC
GTGTCCACGT CGGTCGACGA GGCCACCGCG GAGCCGCGGC TCTCGGCGCG CGGGCTCGGC
TTCAACCTCG CCAGCTGGAA GGTCGACGGG ATGGACCCGC TGGCCGTGCA CCTCGCGATG
TCCGAGGCCG TCGAGCACAT GCGGCGTGGC CGGGGCGCGA CCGTCGTCGA GGTCGACACC
TACCGCTTCT TCCACCAGAA CGGCGGGTTC GCGGGCAGCG CGTTCGGCTA CCGCGACAAG
GAGGAGGAGC GGGCCTGGCG CGCCCGGGAC CCGCTCACGC AGACCGCCGC CCACCTCGAG
CGGCGCGGCA TCATGACCGC CGAGGAGACC GCCGAGGCGA TCACCCGGGC CAAGGCCGTG
ATGGAGGAGA TCGGCCGCGA GCTGGTCGAG CCGCTGCCCG ACGGCAAGCC CGGGCAGCGC
CGGATCCGGC CCGCGGAGTG GCCCGACCCG GACTGGGTGG ACGTCGGCGT GCGCGGCGAC
CTCAGCGAGC TCGACGGCGC CCGGATCGTC GCGGCCGACG GATTCGCCGT ACCCGTGCAG
GAGACGAAGT TCATCGACGC GGTCGCCGCC GTCATGGGCC GCCGCATGGA GACCGACCAG
GGCATCGTCG TGATGGGCGA GGACGTGCAC CGGCTCAACG GCGGCACCAA CGGCGCCACC
CGTGGCCTCA CCGAGCTGTT CCCCGGCCGG ATCCTCGGCA CCCCCATCAG CGAGAACGCG
TTCACCGGCC TGGCCGGCGG CATCGCGCTC GACGGTCGCT ACACGCCGGT CGTGGAGTTC
ATGTACGCCG ACTTCATGTG GGTCGCGGCC GACCAGCTGT TCAACCAGAT CGGCAAGGCC
CGGCACATGT ACGGCGGGGC GTCCGGCGTC CCACTGGTGC TGCGCAGCAA GGTGGCGATG
GGCACCGGCT ACGGGTCGCA GCACTCGATG GACCCGGCCG GCATCTTCGC CACGAACCCG
GGCTGGCGGA TCGTCGCGCC GTCCACGCCG TACGACTACG TGGGGCTGAT GAACACCGCG
CTGCGCTGCG CGGACCCGGT GGTCGTGCTC GAGCACGTCG ACCTCTACGG CTCGACCGGC
CCGGGGCCGG TCGACGACTA CGACTACTGC CTGCCGGTCG GCAAGGCCGC GATCCGGCGT
CCCGGCAAGG ACGTCACGAT CCTCACCTAC CTCGGGATGG TGCCGTTCGT GCTGGGCGCG
GTCGAGGAGT TCGGGCAGGT CGACGCCGAG GTGATCGACC TGCGCTGGCT GGACCGCGCG
AGCATCGACT GGGACACGAT CGAGGAGAGC CTGACCAAGA CCAACCAGGT GTTGATCGCC
GAGCAGGGCG CGGTCGGGAC GTCGTACGGC GGCTGGCTCG CCGACGAGAT CCACCGGCGG
TTCTTCGACC TGCTCGACGC CCCGGTCCGA CGGGTGACCG GTGCCGAGGC GTCGCCGAGC
ATCAGCAAGG TGCTCGAGCG GGCCGCGATC GCCCAGCAGG ACGAGGTCAT CGCCGAGCTC
GCCGAGATCG CGAGGTACTG A
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| Protein sequence | MPEHHPLAPA SPWVEVVATE ADWDAADPQL LRTIYAQLVW IRTFEQYVLD LAASGLIHGP
AHSSIGQEGG AVGSVLALTS ADSVNGSHRG HHQFLAKALH HVEPKGMDPL EAPSEQVRDV
LLRTLAEICG LDRGWSHGRG GSMHLQWKEA GAMGTNAIVG GGVPQAAGFA WSHRQAGTDA
VSVTYFGDGA VNIGSTLETM NLAGAWSLPV CFFIENNRYA VSTSVDEATA EPRLSARGLG
FNLASWKVDG MDPLAVHLAM SEAVEHMRRG RGATVVEVDT YRFFHQNGGF AGSAFGYRDK
EEERAWRARD PLTQTAAHLE RRGIMTAEET AEAITRAKAV MEEIGRELVE PLPDGKPGQR
RIRPAEWPDP DWVDVGVRGD LSELDGARIV AADGFAVPVQ ETKFIDAVAA VMGRRMETDQ
GIVVMGEDVH RLNGGTNGAT RGLTELFPGR ILGTPISENA FTGLAGGIAL DGRYTPVVEF
MYADFMWVAA DQLFNQIGKA RHMYGGASGV PLVLRSKVAM GTGYGSQHSM DPAGIFATNP
GWRIVAPSTP YDYVGLMNTA LRCADPVVVL EHVDLYGSTG PGPVDDYDYC LPVGKAAIRR
PGKDVTILTY LGMVPFVLGA VEEFGQVDAE VIDLRWLDRA SIDWDTIEES LTKTNQVLIA
EQGAVGTSYG GWLADEIHRR FFDLLDAPVR RVTGAEASPS ISKVLERAAI AQQDEVIAEL
AEIARY
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